Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1171 ATGAATTTCTTCAAATCCGTTTTCCTTGATGACCCGGATCCTCCGCCACCCGAACCCGGATCGAGCAATGAGCCGCGAGACCAGGACCCGGATCCCGATTCCCCGCCCTCATCGAATACCACCGATTCCGTTGTGGGTGTCGGTGTCGGCGACGGTTGGAATTTCGGCGGCTTCATGAAAACCCTAACAACTAAATCGGAATCCATAATCGAGACCTACCGTCGCGATCTGCAGGAATTCAGCACCGGTTTGAAGAAGGAAATTGAGGTGGCGCAGGGTTCTCTCGGGACCGTGGGTCACGTCATTGACGAGTTCGGAAATACCGTCGTCAAAGGAACGGCTCAGATCATATCTCAAGGTAAGGACGCTATCCTCGCTGTCGATCTGGATTCCGATTCTGATAGTAATAGCGCCAATAGGAAGAGCCTGGATTTGACGCGGTATAGTAGGTTCGACGCTCAGATTCGTGCTATTCAGGGTGATATTGGCACTTATTCCGAGGAGCCCGAGGATGTAAGTGAGTTCAATGAATGGAAATTAGGGTTTTCGTTAGAGGGGAAAAGTGATGAAATGGAGGGGCTTTTCAGAGAGAATGATAATATGGAGAGTGTTTACAAAAGAGTTGTTCCGAGCAGTGTGGATCACGACACTTTCTGGTATAGGTATTACTATAAGGTTTATAAGCTCAAGAAAGCTGAAGACCTGAGGGCTAGGCTTGTGAGTGGAATTTCTGGGGAGGATGAAGATTTGAGTTGGGAAGTTGAAGATGATAATGAAGATGAGGATGGAGGTGTTGCTAAACCTGTTGTTTTGAATAAAGACGTTGGTGGGGACAGTGTGGATACCCAGTTGCGTGTTGCCGGCGATGAAGGGGGAACGAAAAAATTGGACGTGGAAGAAGAGTCTAAAGTAGAAAAGAGAGACAATTTATTGCAAAGTGAGCAAGTTGGCAACAAGATAGATAAGTCCGTTGAGGAGCCACATATTGAGAAATCTGAAATTGTTGGTGAGATGGCTGGTGTTGATGAGGCATCAAAAGTGGATGTTGGTGTGAGCAAGAATGATCCTGCAGCTGAAACTGATGAGAAGGTGAAGGAAAGGGAGGGGGGTCATGAGAAATCTTCCAGTAAAAGTAACGACTCCTCAGTTGTTGAAATTAAGCACTCGGCAAATGAGGATGGGGATGAGGAGGACCTTGGGTGGGATGATATTGAGGATCTTAGCAGTATTGATGTGAAGGAAACATCGCATAGTGGTGGCACAAGCAAAGTTGATTTGCGGAAGCGATTTAGTGCTGCGGAAGAAGAGGAAGACTTGAGTTGGGACATTGAAGATGATGATGATGAGCCTCCCAAGGTTTGA 1362 0.4699 MNFFKSVFLDDPDPPPPEPGSSNEPRDQDPDPDSPPSSNTTDSVVGVGVGDGWNFGGFMKTLTTKSESIIETYRRDLQEFSTGLKKEIEVAQGSLGTVGHVIDEFGNTVVKGTAQIISQGKDAILAVDLDSDSDSNSANRKSLDLTRYSRFDAQIRAIQGDIGTYSEEPEDVSEFNEWKLGFSLEGKSDEMEGLFRENDNMESVYKRVVPSSVDHDTFWYRYYYKVYKLKKAEDLRARLVSGISGEDEDLSWEVEDDNEDEDGGVAKPVVLNKDVGGDSVDTQLRVAGDEGGTKKLDVEEESKVEKRDNLLQSEQVGNKIDKSVEEPHIEKSEIVGEMAGVDEASKVDVGVSKNDPAAETDEKVKEREGGHEKSSSKSNDSSVVEIKHSANEDGDEEDLGWDDIEDLSSIDVKETSHSGGTSKVDLRKRFSAAEEEEDLSWDIEDDDDEPPKV* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1171 453 ProSiteProfiles BSD domain profile. 178 230 IPR005607 -
Vra8g1171 453 MobiDBLite consensus disorder prediction 276 453 - -
Vra8g1171 453 Pfam BSD domain 178 234 IPR005607 -
Vra8g1171 453 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 90 - -
Vra8g1171 453 PANTHER SYNAPSE-ASSOCIATED PROTEIN 90 447 - -
Vra8g1171 453 Gene3D BSD domain 140 242 IPR035925 -
Vra8g1171 453 PANTHER PROTEIN, PUTATIVE-RELATED 90 447 - -
Vra8g1171 453 PANTHER PROTEIN, PUTATIVE-RELATED 1 90 - -
Vra8g1171 453 MobiDBLite consensus disorder prediction 1 46 - -
Vra8g1171 453 SUPERFAMILY BSD domain-like 147 236 IPR035925 -
Vra8g1171 453 MobiDBLite consensus disorder prediction 288 312 - -
Vra8g1171 453 MobiDBLite consensus disorder prediction 355 375 - -
Vra8g1171 453 SMART wurzfinal6 178 230 IPR005607 -
Vra8g1171 453 MobiDBLite consensus disorder prediction 406 436 - -
Vra8g1171 453 MobiDBLite consensus disorder prediction 319 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1171 Vra-Chr8 26756898 26758599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1171 - - gmx:100792113 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1171 8 26756898 26758599 Vra8g1171 8 26756898 26758599 ECH
Vra3g0075 3 803354 805027 Vra8g1171 8 26756898 26758599 PCT