Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1163 ATGGCGCCTAGCCGCAGAAAGGGCGTCAGTAAGGCGGCGGCGGCGGCTGCCGCCTGCCGGCAGTGGAAAGTGGGCGATCTTGTGCTCGCCAAAGTCAAGGGCTTCCCTGCATGGCCTGCCACGGTAAGTGAGCCAGAGAAGTGGGGTTACTCTACTGATTGGAAGAAGGTGCTTGTTTACTTCTTTGGAACGCAACAAATAGCATTCTGCAATCCTTCTGATGTAGAAGCATTTACTGAGGAGAAAAAACAGTCTCTTCTTGGAAAACGTCATGGAAAAGGTGCTGATTTTGGTCGTGCTGTTCAGGAGATAATTGACAGTTTTGAGAAATCAAAAAAAGAATCTCAGATTGATGAAACTGGCCTTGTTGGCGATGTTGCTAATGCAGATATTTCAAATCCTGTTAACTTATCTGCCAAGGATCAGACAGATACCCCCGAGTTGACTTACACATTACCTAAGAATTCTTCAGATTCTATTACCAACAAACATGAAGAGGTAGTATGTGCAGCAGAGGATGAGTCAGCTGCTGTATATAGAGATGAATCTGATAATAAGGAGGCAATGTTGGGGGAGCCTACTGATAAGGTTGCTGTGGTAAAATCTCCTAAGCCAGTTACTTATTCTACTCGAAAAAGGTCTGTGACTGACTTATGCCTGCAGGGTAGCGTAATAGAGAAACATACCTCAGTAAGAAGGTTTAGAAATCCATTGCGTGCCCAAAACTTTGTGTTGCATTATAATGACGGTGCACAGGGTGCTGGTGACCCATCAACTACTGCAGCCCAGACTGCATGTACACGAAGGAATAAATGTGTTAGGAAGTCTCCTGATCTTTCTGGATGTGATGATTTTGAGTCATCTGCTTTTGTCTCGACTGGTAGCATGGAGGACAACAGTTCTGAAATTATAACAACTGATTCTGATACATTTAGTTTGAATGAGGGCAGTACAATAGATTCAAATTTTAAACTTGAACTCTCGGAACCTGTTGAATGTTCAGAAGTTGAGTTGAGCAAAGGGCTTGGTCTGAAAATAAGACCTGTAGTCAATAAGAAAAAAAGAAAACCCAATAGGAAAAGGGCAATTAATGATGCGTCTAAGCCAACCTGTAGGACAGAGGAGGAGGCTGGTTTGCAGAATGCCAGTCAAAGTTCACAGAATATTTGTGAAAATTCAAAAGAAAGATGCTTTGAACAAGATGGGGATGAGCACTTGCCCCTTGTCAAACGAGCAAGAGTCAGGATGGGTAAATCATCGGTGGAGGCAGAACGTCATAGCACTCTCCAATCTCAAGAAAACTACTGTAAAGAAGATACTATTACTAACTCAGCACATCAGATTATCACATCTTCAAATTGTGAGAATGGTAGCCCTGCTGATGGAGACTCATATGTACTGAATGGAGCTCTGGATAATGTTTCTCCAAAATTCTCAGTTCCGTGTTCCAATACTCAGATATGTAATACTAAGAAAGATCAAACATTCAGCTCTGTGGATGGTGAAGCTGCTTTACCTCCATCTAAACGCCTCCATCGAGCTTTAGAAGCCATGTCGGCTAATGCTGCTGAGCTAGGCCAAGCTCATATGGAAGCTTCATCATCCACCATAATGACAGCAAGTGGTATGTGCTGTATATCTGCTGTGAAGAGATGTCCGAGTATTACCATTAATAATCAAGAATGTAATGATTTTGGGCTGCAAAAGTTGGATACTTTCAACATTGATTCGTCTCATATCAATGTGAATTCAACCAATTCAAATCCAATGATTTTATCTGAGAATAAATCACCTCTTCAAGTGGGTAAGCAACAGCATGAAACCAGCAATGATATTCTCCCAGGTGCCACCATTCAAGCTGTTGAAGAGCTTAGTGATCATATGGTTTGCCATGAAGCTGATTTAAAAATTCAGTCAAATGGAGAAAATTGTCCTATTGTTGATACAAAATGCTGTGATGAAGAAAGCATTCAATATTCACCAGATCCATCATTGCTTCAGAACAATGAAGACCACATTAGAACTTTGAGTCATTCAAATTCAGCATCTGATGCATCAGGGCAAAATGGAATAAGCCTTGACCCTGTGATGGGTGTGAATGAAAATGCTGCTTTATTGCCTCATAATGTTGATATGGCTCGGAATGAGGTTGCTGTACGTGAGGATACAGAATGCTTCAAGCCAGCAGTTGATGATATTGGCACAGCAAATGATATGCACGAGGTTGTGAAAGAGGTAAAATGTCAAGTTCCACAGGAGGATATGAATTCTGTCTCAACATCTGATGACTGTCTGGGTGACAAGGGTATTTCAGACATTCGGTCAAGTCCATCCTTGACAGATGGGGGTGATTGCATTCCGCAAGGATCTCCTCCAACTACTTCTGTTTGCAATGTTTCTACATCAGACAGTAGTAATATTCTCCACAATGGAAGTTGTAGCCCTGATGTACATTTACACCAGAAGCAAACTTTATCTGGTCCTTTTGATGGATGTAAAGATGGGTATGTTGCAACTCAACAGTCAAGATGTATAGGGAAGTCAACTGAAGCAGGACGAGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGTATTGCAGATAAGGTGATGGATATTCTTGCTCATTGTCTGGAAATGGAGTCTAGCATGCATCGGAGGGTGGATTTATTTTTTCTTGTTGACTCAATTGCACAGTTTTCTCGTGGCTTAAAAGGTGATTTTTGTGGGGTATATTCGTCTGCCATCCATGCAGTCCTTCCACGACTATTATCTGCTGCTGCTCCTCCTGGAAATACTGCACAAGAGAACCGTAGGCAGTGTCTCAAGGTTTTAAGGCTGTGGTTGGAGAGAAAAATCCTACCAGTGCATGTAATTCGCCGTCATATCCGGGAACTATCTTTATACAGCAATTCAGCTGCTGCTGGTGTGTTTTTGCGTCGATCGATGAGAACAGAGAGGGCATTGGATGACCCTGTTAGAGAAATGGAGGGCATGCTTGATGAATATGGAAGCAACTCAACTTTTCAGCTGCCTGGATTCTGCATGCCCCGGATGCTTAAAGATGAAGATGAGGGTGAATGGAGTGATTCTGATGGTGGGAACTTTGAGGCTGTCACGCCAGAGCATACTTCTGAAGTACAAGAAATGAGTTCTGCAATTGAAAAACACAGGCATATCTTGGAAGATGTTGATGGTGAACTTGAAATGGAAGATGTAGCTCCCTCAAATGAAGTTGAAATCAATTCGACTTCTGATGTTGGTGGAGAAACTGCAAAGCAGTTTGAGAAGAATCTGGCCCCGCCCTTTGCTCCTCTACCACAGGATGTGCCTTCATCTTCCCCACCACCACTACCACCGTCATTCCTTCCTCCACCTCCTCCTCCACCCCCACCCCCACCCCCAGTTCTACACCACATGCCATCTACCTCTGATCCATATAACACCGTAGTTAATTCAGAAGGCTATACTGTTTCACAGACTCTTAAAGACAACCCACTTCCCTCTGTGGTTCAGCCCATGGCTGCCCCTAGGCATAACCAACCTATCAATGATGCAGTGCACAATCGAGTCCCTGAATACAGAGACATGCACATGCCAGAATCTAATTGTTCTTTCAACCGTTTTCCTGTACCTCCTCCAGACAATTATGGACATACTGATGGTGTTGCTATGCGTAATAAGGGGTATTCTATTCGGCCACCTCAACATGTGCCGTCCAATCAGTTTTCTTTTGTTAATGGGGAGCGGCATGTGGAACATCGAAGGGAGGTTCCACCACCCCCTCCTTATTCCAGTAGGCAGCACTTTATGCAGAACATGGAGAGAGAGAACTTCTATAATAATAATCATGAGAGAATAAGACCACCTCCTTATGATTACCATGAGAGATGGAATATTCCTATGCCTTTTCCCGGTCCTCGATATCAGGAAAAAGGTGTGCCTGCTCCTTATGGTTGTCATCCGTGTGAATCTACCAGAATACCAGATCATGGGTGGAGATTTCCTCCTCGCTCTATGAATCAGAGGAACTCCATGTCCTATAGACCACCATTTGAAGACGCAATTCCAGTTTCAAACAGAGGTCCAAGCTTTTGGCAGCCTAGGTGA 4176 0.4339 MAPSRRKGVSKAAAAAAACRQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSTDWKKVLVYFFGTQQIAFCNPSDVEAFTEEKKQSLLGKRHGKGADFGRAVQEIIDSFEKSKKESQIDETGLVGDVANADISNPVNLSAKDQTDTPELTYTLPKNSSDSITNKHEEVVCAAEDESAAVYRDESDNKEAMLGEPTDKVAVVKSPKPVTYSTRKRSVTDLCLQGSVIEKHTSVRRFRNPLRAQNFVLHYNDGAQGAGDPSTTAAQTACTRRNKCVRKSPDLSGCDDFESSAFVSTGSMEDNSSEIITTDSDTFSLNEGSTIDSNFKLELSEPVECSEVELSKGLGLKIRPVVNKKKRKPNRKRAINDASKPTCRTEEEAGLQNASQSSQNICENSKERCFEQDGDEHLPLVKRARVRMGKSSVEAERHSTLQSQENYCKEDTITNSAHQIITSSNCENGSPADGDSYVLNGALDNVSPKFSVPCSNTQICNTKKDQTFSSVDGEAALPPSKRLHRALEAMSANAAELGQAHMEASSSTIMTASGMCCISAVKRCPSITINNQECNDFGLQKLDTFNIDSSHINVNSTNSNPMILSENKSPLQVGKQQHETSNDILPGATIQAVEELSDHMVCHEADLKIQSNGENCPIVDTKCCDEESIQYSPDPSLLQNNEDHIRTLSHSNSASDASGQNGISLDPVMGVNENAALLPHNVDMARNEVAVREDTECFKPAVDDIGTANDMHEVVKEVKCQVPQEDMNSVSTSDDCLGDKGISDIRSSPSLTDGGDCIPQGSPPTTSVCNVSTSDSSNILHNGSCSPDVHLHQKQTLSGPFDGCKDGYVATQQSRCIGKSTEAGRAALLYFEAMLGTLTRTKESIGRATRIAIDCAKFGIADKVMDILAHCLEMESSMHRRVDLFFLVDSIAQFSRGLKGDFCGVYSSAIHAVLPRLLSAAAPPGNTAQENRRQCLKVLRLWLERKILPVHVIRRHIRELSLYSNSAAAGVFLRRSMRTERALDDPVREMEGMLDEYGSNSTFQLPGFCMPRMLKDEDEGEWSDSDGGNFEAVTPEHTSEVQEMSSAIEKHRHILEDVDGELEMEDVAPSNEVEINSTSDVGGETAKQFEKNLAPPFAPLPQDVPSSSPPPLPPSFLPPPPPPPPPPPPVLHHMPSTSDPYNTVVNSEGYTVSQTLKDNPLPSVVQPMAAPRHNQPINDAVHNRVPEYRDMHMPESNCSFNRFPVPPPDNYGHTDGVAMRNKGYSIRPPQHVPSNQFSFVNGERHVEHRREVPPPPPYSSRQHFMQNMERENFYNNNHERIRPPPYDYHERWNIPMPFPGPRYQEKGVPAPYGCHPCESTRIPDHGWRFPPRSMNQRNSMSYRPPFEDAIPVSNRGPSFWQPR* 1392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1163 1391 Pfam CID domain 859 981 IPR006569 -
Vra8g1163 1391 Pfam PWWP domain 25 108 IPR000313 -
Vra8g1163 1391 CDD HDGF_related 20 104 IPR035496 -
Vra8g1163 1391 ProSiteProfiles CID domain profile. 851 992 IPR006569 -
Vra8g1163 1391 MobiDBLite consensus disorder prediction 1122 1173 - -
Vra8g1163 1391 MobiDBLite consensus disorder prediction 1126 1162 - -
Vra8g1163 1391 PANTHER PWWP DOMAIN PROTEIN 1 1391 - -
Vra8g1163 1391 Gene3D - 857 995 IPR008942 -
Vra8g1163 1391 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Vra8g1163 1391 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1391 - -
Vra8g1163 1391 SUPERFAMILY Tudor/PWWP/MBT 19 115 - -
Vra8g1163 1391 MobiDBLite consensus disorder prediction 353 387 - -
Vra8g1163 1391 Gene3D - 13 119 - -
Vra8g1163 1391 SMART 558neu5 858 989 IPR006569 -
Vra8g1163 1391 SMART PWWP_4 22 79 IPR000313 -
Vra8g1163 1391 MobiDBLite consensus disorder prediction 1364 1391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1163 Vra-Chr8 26626986 26643343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1163 - - gmx:102664053 2122.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1163 8 26626986 26643343 Vra8g1163 8 26626986 26643343 ECH
Vra3g0085 3 908337 921454 Vra8g1163 8 26626986 26643343 PCT