Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1158 ATGGCTATGACATTTCTGGCAATTGTGCCAAAGATCTTGAGTCAGACTTTACCAACACCATTTCTTCATCCACTTTGTTTATCCCAACTAACATTGGCAAACTATGCTTGTGCAATGCTGCCTCTCCCCGCAGCACCGGCAGCTCCACCACCACCACCACCAGCAGCTTCCCCCGGTGATCATGGTTTTAGAGGTAATGAGCGGTCCACTCTTCAAGAAGAAGACTGTTGCCGGTGGGCTAAGGAAATAGACAACCAATGTGTATGTGAAGTCTTAGTTCTGTTGCCACCCTTCCTTACTAAACCTTTGCATCAGTACGCAATTAGCATTGGAGAATCCTGTAACGTCACTTACTCCTGCGGTGGCACAATATAA 375 0.4693 MAMTFLAIVPKILSQTLPTPFLHPLCLSQLTLANYACAMLPLPAAPAAPPPPPPAASPGDHGFRGNERSTLQEEDCCRWAKEIDNQCVCEVLVLLPPFLTKPLHQYAISIGESCNVTYSCGGTI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1158 124 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 124 - -
Vra8g1158 124 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 69 118 IPR036312 -
Vra8g1158 124 MobiDBLite consensus disorder prediction 48 67 - -
Vra8g1158 124 PANTHER - 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1158 Vra-Chr8 26593782 26594156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1158 - - var:108324620 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0088 3 952927 953560 Vra8g1158 8 26593782 26594156 PCT