Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0088 ATGATGGAGATTCTCAACCTAATAACACTGCCTCTGCTATTGCTACTAACATTAGTCACAAAGACGGAGAGCCAAATAAAACCCCCACTTATTACGGTGGCAAAGCCTCCGCGTCCACTCTGTGGATCACAATTTGCACTGGTGAACTATGCATGTTCCAGGTTGCCGTTCCGCCATGGAGCGCCACCGGCTGATTCTCCTCCACCCCCAGACGGTGAAGATGGTGACGGAGAGACGCACCACAGTCACAGTCATCACAGACATAACCACAGACATGGACACGGTCACAGACACCACCACCAGACCCCTGAAGAAGATAACTGTTGCCGGTGGGCGAAGGAAGTGGACAGCCAATGTGTGTGTGAACTTCTGCTTCGCTTGCCACCCTTCCTTGTCAGACCTGTGCACCAGTACACACTCAACATTGGAGACGCTTGTAACATCACTTACTCTTGTGGTTCACCAATCTGA 471 0.5117 MMEILNLITLPLLLLLTLVTKTESQIKPPLITVAKPPRPLCGSQFALVNYACSRLPFRHGAPPADSPPPPDGEDGDGETHHSHSHHRHNHRHGHGHRHHHQTPEEDNCCRWAKEVDSQCVCELLLRLPPFLVRPVHQYTLNIGDACNITYSCGSPI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0088 156 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 98 150 IPR036312 -
Vra3g0088 156 MobiDBLite consensus disorder prediction 83 98 - -
Vra3g0088 156 PANTHER - 3 156 - -
Vra3g0088 156 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 156 - -
Vra3g0088 156 MobiDBLite consensus disorder prediction 59 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0088 Vra-Chr3 952927 953560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0088 - - var:108327563 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0088 3 952927 953560 Vra8g1158 8 26593782 26594156 PCT