Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1131 ATGGATAGAACCAGAGAATCCAGAAGACCATCCATGGCCTCCTCCACCAGACGCAGACATCGAACTATTGCTCTCAGAGACTCTTCCGAGGAAGGAGCTGTGGAATTACGCGAAGGTGTCAATAAGAGAGGAAGGAATCGAGATAGGGATAGGGATTCGGTGAACAGGAGCAAGCGGAGGAGAGGCTCTCACTCCCAAAGCACCGAAGAGAGCGTTGGTAACGAACAAGACGAGGATGTTGTAGACGTTGGCGTTTCTAAGATCCGTTCTCCTAATAATCCGACGTCGTTTTCCTCCGATCAGAACCATCGCCGGGTCTTCACGCCATCGAAACCGCCTCCGTTTAAAATAACGGAGGAGATGATCGGCGTGACTGTTCCCAGGAAAGCTCGTTCAGCTTCTGCGAAAAGGTCTCATGAAAGTTTGGTCTCCGCAAGTAGCGGCGGCGGAGAGGAGCAGAATTTCCGGCAACGGTCGGATTCCCCCGGTGGAATGAGTGTTGAAGCGGCCTCGCCTTCTTCTTCGAATGTTTCTCTTAGGAAGAAGATGAAAGAGATTGAAGTTGTTCCTAAGGCATCAACATCGTCTTCCTCAGACATCGAGATTGAGATAGCTGAGCTACTGTACGGTTTGAAGACTTCAAAGAACCACGAATCTTCTTCGGAAAAGCCTGAGGCAGGTGTCAATCACCGCAACGCCACTGTTCCTTGCCCCTCTAAGGATGTTGAGAAAAAGAAAATGGAAGATGACAACAATTATTCCACCACGGTTTCGAATAATTCAAGTGAAGAGTTAGTCAGGATTCAGATTGAGCAACCTACTGATGTGGATTGTCACGATCGTCCATCATCAGAGGCCCCGATAGAGGGTATAGGGGAAGACAATATGAAATCTGGTTCTGGGTTTGGGGATGCTTCTGCGAATGGAAGATCGGTTTTCCTTTCAAAGAAATCGCCGTCGCGCATCAAGTTGGATTCCGATAAACAAGAATGGGCTTCCAACAGAGTGATCTCGGTTGTTGCAGAGGGCAAAACCCAGCGAGTAGGCAAGTTTGAGATAGATCTGATGGCTCCTCCTCCTATGGCGCTTTCCCCTGAACGGGATGAATTGTCATCAGAAACTAAAGCTTTGGCACTGGATGCGGAAATGAATGGAAATAGTGTCAAGTTGGAAACACCGGTTAAGAAGGGGAGAACTCCGGAAGAAATTCAAAAGGCGAAAATGATCGTATTTAACGAGAAGTTGGATGTGTTAAAACACGATTTGGAGAAGCCAAACGATGACGATAAGACAAACAATAAATTAGAAGAGAAGGATAGGAACAAGGAATTGCTTACCGTATCATCAAATCCCAAAGTAGAGAAAACCGTTCAATCTACTTCAATGCCTTTATCAACAGCTGAATCAGGACGGTCCAGCAGTCTCCCTCCCATTGGATACAAGCCGCTCTCGGAGCCAGTTGTGAAGACGGAGAAAACTATAAGATCATTGACACAGCAGCATGTGAATTTTGTCCTCTCTCAAAGACAACCGAAGAGATGTGCAACACATTACTACATTGCTTGTAACATCTTACACCAACAATTTACAAAGATGAGCCCCCCGTTGCCAGCAGCTACTGGCCCTGGTTCTCCGTGTGGCACAAAACCCAACAAAGTCAACTGTGTGCCCTCTGCAGAAAGTATGGCCGTTGGGAAGCAATCTCAAAAACACTTGGCAGTTGTAAACCAGAATTCTGCACAAGATAAAGGTTGGGCCGCCACCAGTAATGCCAATGTTACCGCAGCCAAATGTTCTAATAATGCCAATCCAATGGATTCAACTCATAGGGTGCAGCTTGTGTTCCAGCATGGTCCCAATCCTGGGCCACCGGGCAATCTAGTGCATGGTCCTGCTTTCCTGTACCCTCCAGGGCAGCATCAAGCTTCAGTTACGGCAACTACTAATCAGGCAGGAGCTGTGAATTCCCCTAATAGCAGTTCCTCGTATAATATATCCCATAGCTCAGTAGGCGGGTCTCTTGGTACCTCCTCAACTTTGCCAGTGGTAGCTCCTGCAATGAGCTTTAGCTACCCAAATTTTTCAGCCAATGGTTCCTCTCCGTATATGACAATAGTTCACAATAATGGGTATTCATTTCCTTTCTCAACTTCTATTGGAGCAGCTGCGACAATCAGAGGTGCAAGTCCTCCGCAAGCAACACATGTGATCAGTGGGCCTTTCTACTCTTCTCAAACGTTCCATCCACTTCAGCATCCTCAGTCACAAGCACTGGTACAACCAAGTTATCTTAATGCAAGCACATCAAGCAGTTCATCATCTCATAAACAGCCACAAGTTAATGGCAGTAATATTTTGACCTCTACAACTATGGAGCAGCAGTCACAAAAGCGACAGACCTCACTCTCTCATCTACGCAAGCATGAGACTGAGACAGGTGGAGGTAATGCACATTCTGTTGCTACTCGAACATCTTTCCCTCAGAAGACTGTGCATGGGCAGAATTTTACAATTCCAGTTCAGCCAGTGAACTATTCTTTTAAGCCATCTGCAGCATCAGACATTGTTGTTGGCAATAGTGGAAGTTTTGGTGAAAAACAACAGCAGCAGCAGGCTTTAAAAGGAGGGGTGGAGAATATACCATCTCAAGCATTTGCAATATCATTTGCTGCATTTAATGGGACCAGTGTTCCTTCAAACCTTAACTTCTCATCCATGGCACAGAATCCTGTGATACTTCATAGTGTGCCGGATATAGCATGGCAAGGGTATCAAGCTGCAACCTCAACTCACACTACTCAACAGATGAATTATTCAATTACTGAAACGAAGAGTGGAGGAAATTCTTCGCACCAAGAAGATGAAAAGAAAAATGCAAATGCTAAGTCTTCAAGCAACGGACCAACCACCCTTGTTTTTGATAATTCATCCAAGAATCTTAACTTCATGCTATCTACTGGAAACTGGTCTAGTCAACCTGTTGCTTCAACTTCAATAACAAGCGTGCCTCTTTCAAGTAGTGCTTCAAGTTCTCAACAGCCACAGCATTCGCTTCAGCTTTCAAAGCAGCATGCTGGGCAACAGCAGCAACCCACTCCGGCAAATCGATACAAAGCATCATCCACTAATAGCACCCCTGGTCCTGCTACAAAATTTGCAAACAATGCCCCTGCTTTCTCACAAACTCTTACTCAATGCAAAAGTTCTAGCCAAGCTTCTCACGCTAAAGCCTCGGGTAGAACTTCAGATTCTCATGCTCATCACTCATCTATCATGACACCCAATGCTCCAACCTTCAAGAGTTTTTCTCAGGAACAAGGGAGAATTTTGTCCGGTCATATGCAAATTTCTTTTGGTGGAAATTACATAACTTCCCTGCCACCCCAAGGGCAACAAGTACTCAGTGGCAACCAGCCTATGTGTAGTACACCACCTCAAGGAAATATTAAGTCAAATTCGGAAGGAAGTAAAGTTGGTTCGTCAGTCAACGCTTCACAATTTCAACAAGCTGAAAATTCTGCTGGGAGTGGCCAAAAATCTTCTCCAGTTTGTGGGAGAAATGTCCCATCAATATTAAGCTCATGCACCAGCCACCTATCAGAGCTAAAATATTAA 3615 0.4548 MDRTRESRRPSMASSTRRRHRTIALRDSSEEGAVELREGVNKRGRNRDRDRDSVNRSKRRRGSHSQSTEESVGNEQDEDVVDVGVSKIRSPNNPTSFSSDQNHRRVFTPSKPPPFKITEEMIGVTVPRKARSASAKRSHESLVSASSGGGEEQNFRQRSDSPGGMSVEAASPSSSNVSLRKKMKEIEVVPKASTSSSSDIEIEIAELLYGLKTSKNHESSSEKPEAGVNHRNATVPCPSKDVEKKKMEDDNNYSTTVSNNSSEELVRIQIEQPTDVDCHDRPSSEAPIEGIGEDNMKSGSGFGDASANGRSVFLSKKSPSRIKLDSDKQEWASNRVISVVAEGKTQRVGKFEIDLMAPPPMALSPERDELSSETKALALDAEMNGNSVKLETPVKKGRTPEEIQKAKMIVFNEKLDVLKHDLEKPNDDDKTNNKLEEKDRNKELLTVSSNPKVEKTVQSTSMPLSTAESGRSSSLPPIGYKPLSEPVVKTEKTIRSLTQQHVNFVLSQRQPKRCATHYYIACNILHQQFTKMSPPLPAATGPGSPCGTKPNKVNCVPSAESMAVGKQSQKHLAVVNQNSAQDKGWAATSNANVTAAKCSNNANPMDSTHRVQLVFQHGPNPGPPGNLVHGPAFLYPPGQHQASVTATTNQAGAVNSPNSSSSYNISHSSVGGSLGTSSTLPVVAPAMSFSYPNFSANGSSPYMTIVHNNGYSFPFSTSIGAAATIRGASPPQATHVISGPFYSSQTFHPLQHPQSQALVQPSYLNASTSSSSSSHKQPQVNGSNILTSTTMEQQSQKRQTSLSHLRKHETETGGGNAHSVATRTSFPQKTVHGQNFTIPVQPVNYSFKPSAASDIVVGNSGSFGEKQQQQQALKGGVENIPSQAFAISFAAFNGTSVPSNLNFSSMAQNPVILHSVPDIAWQGYQAATSTHTTQQMNYSITETKSGGNSSHQEDEKKNANAKSSSNGPTTLVFDNSSKNLNFMLSTGNWSSQPVASTSITSVPLSSSASSSQQPQHSLQLSKQHAGQQQQPTPANRYKASSTNSTPGPATKFANNAPAFSQTLTQCKSSSQASHAKASGRTSDSHAHHSSIMTPNAPTFKSFSQEQGRILSGHMQISFGGNYITSLPPQGQQVLSGNQPMCSTPPQGNIKSNSEGSKVGSSVNASQFQQAENSAGSGQKSSPVCGRNVPSILSSCTSHLSELKY* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1131 1204 MobiDBLite consensus disorder prediction 941 972 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 1002 1105 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 1 180 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 214 304 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 789 821 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 421 479 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 20 66 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 137 179 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 421 445 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 446 473 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 252 268 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 273 287 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 88 106 - -
Vra8g1131 1204 PANTHER TIC-LIKE PROTEIN 1 1204 - -
Vra8g1131 1204 PANTHER PROTEIN TIME FOR COFFEE 1 1204 IPR039317 GO:0042752
Vra8g1131 1204 MobiDBLite consensus disorder prediction 1127 1187 - -
Vra8g1131 1204 MobiDBLite consensus disorder prediction 237 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1131 Vra-Chr8 26139051 26144552 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1131 - - gmx:100784698 1697.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1131 8 26139051 26144552 Vra8g1131 8 26139051 26144552 ECH
Vra3g0111 3 1220177 1225599 Vra8g1131 8 26139051 26144552 PCT