Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0111 ATGGATCGAACCAGAGGAAGATCGTCCTCTATGTCCGCAAACGCTTTCCCCAGACGCCGTCACCCTAATATCCCCCTCCCACCCACTTCTCAGGAGATGCAGGAGACGAGGTTAAAGGATAATAATGACGATGATGATAATAATAGTAAGAGGGAATGGACGAAGAAGAGGAGAGGGAGCAACTCTCACAGCACCGAGGAAGAGAGTGTGGGGAATGAACAAGACGCGCGGTTGCATTCTAATAATACGGCGTCCTCCGCATCTGATCATAACCACCGGGGGCGGAACGTAATCGACCAAGTGATGATCGGAGCTATAGTGCCCAGGAGGACTCGTTCAGCTTCTGTGAAAAGACCCCATCACAGTTGGGTTGAGGAGCAGAGTGCTGAAGATGCGTCGCCTTCTTCTTCCAATGTTTCTCTTCCCAAGAAGATGAAAGCGATTGGACCGTCTTCGTCGAATCAGGAGGACATCGAGATTGAGATAGCTGAGCTTCTGTACAGTTTGCGAGCTTCCCAAAACCATGATTATTCTTCTTCGCAGAAGGATAAAGCGAGTGATTCCCCTGCACTTTCGTCTTCCCCTGCCATTGATGTTGTTGAGACGAAGAAAGTGGAAGATTACAGTTCTTCTTTTTGCATTTTACCGCCGAACAATTCAACTCCCGAGTCAGTCGTAATTGAAAGCCATCAACCTGCGAAAATGGAGATACCATCGTCCGTGTCGCCTAGGACGTCTGGAGTTGATGGTATTGAGTCTTCCCAGGGTCCAAAACAGGACGCGGAGGAAGATAGTTTGAGTCCAGGTTGTGGATGTGGGGATGCTGTAGATGGAAAATTAGAATCCAAGTTGGTTGTCGACAAACATGATTGTGCTTCTACTATAAGGACATGCGATGATGTTCTGGAGGGCAATGGCAAACCCAAGTTTGAGATTGATCTAATGGCTCCCCCTCCTGTGACCTTCTCATCAGAATGGGGTAATTTGTCTAGGGGTGAAGACAGGAATAAGGTTGAAGACAAGGTAGAAAGTTTGAGTAAGAAGGAGCAAACACTGGGAGAAATTGAAGAGGTGAAAATGAAAGTTGATTTGGAGAAGCCAAATGGGCATCATGACCTAGCGACAAACCATGAATTAGGAGAGCTGGGCAGGAATAGGGAACAACCAACTCCTACCGCTACAAATGCCAAACTGGAGAAAACTGGTCTCTTACACTTCTTTACTTCTTCAGCTCAATGTAGTTCAATGTCTTTGTCAGTGGATGTATCCGAAAGGCCAAGTGGTTTCTCTCCCCTTGGTTACGTGCCGCCCATGGGGACAGCTATGAAGACAGATAAAACAACAGGATTATTGACAGCCCCTCAACATGGGAACTTTGTGTTGTCTCAACCTCGACCAAAGAGATGTGCAAGTCACGGTTACATTGCTCGGAACATCTTCATGCACCAACAGTGTACAAAGATGAATACCCTTTTGCCGTCCACAATCGGCTCTGGTTCTATGTGTGACGCAAAGCTCAGCAAAGTCCATTCTGCTGAAAGTGTAGTTGTTGGGAAGCAGTTTCATAAACAGTCACCAGGCGTCAGCCATAGTTCTGCACCGGAGAAGGGATGGACTGCCACTAGTGATTTTAGTGTTGCTGCTATTAAAAAAAGTTCTGGTCCTGCCAACCCAGTGGATGTGACGCAAATGAAGCAGCTTATGCTTCAGCAAGGTCAACATCCAGGGTCTTCTGCTAATATAGTGCATGGTCCTGCTTTTCTAATCCCTCCTGGCCAGCATCAAGCATCTGTAATACCAGGTACTAGTCCAGCTGGTGGTGTGAACAACGCTAGCAATGCTTCCTTGTCTAATAAATTCCAAAGTTCCCCAGGTGTATCTGTTGGTGGCGCAACACTGCCAGCAGTTGCTGCTACAATGAGCTTTAGCTACTCAAATTTGACAGCCAATGATGCTCCATATATGACAATAGTTCCGAATGGTGGGTATCCATTCCCCTTTTCAACTCCCCTTGGACCATCTGCAGCTATCAGAGGTGCAAGCCCTGCACAGTCAACACCTATTCTCAATGGGCCTTTGTACTCTTCTCAGATCTTCCACCCACTTCAGTATCCACAACAGCATCCTCACTCCCAAACACTCGTTCAACCTAGTAGTTATCTTAATGGAAGCACATCTAGTGTTTCATCATCATCCCATAAGCAGTCACAGGGAATGCAAGGTAACAACAACCATATTTTGTCCTCCACAACTATGCAACTTCAGCAGTCACAAAAGCAGCACACCTCACAGTCTCATCTTCGCAAACATGAGACTGGGATAGCCGGAGATAATTCTCCATTTGCTGCAAGTGGAACAGCTTACTCCCAAAAGAATGGATTTGGGCAAAACTTCCCTATTCCAGTTCAGCCACTGGGCCTTTCTTTAACGCCATCTACAACATCAGATAGTGTTGGTGGCAACAGTGGAAATTTTGGTGACAAGCAGCAACAGACTTTGATGGGGGGTCTTGAGCATATTCCATCTCAACCACATGCAATCTCATTTGCTGCATATAATGGGACAAATGTTCCTTCAAATCTTAACTTCTCAACCATGGCACAAAACCCTGTAATATTTCAGAGCCTGCCTGATATTGCATGGCAAGGATATCATGCTGGAAGTGCATCTCATGCAACTCAACAAAAGATGTATCCCATTATAGAAGGCAACAGTGGCGATAGTTCTTCCTACCGTGATGATGAAAAAGCCACTTCCGGGAAGCCGTCGACCAACGGACCAACAACCCTTGTTTTTGATAATTCAGCAAAGAATCTTAACTTAGTTTCATCTCCCATGAATGGAAACTGGCCTAGTCGTTCCATTTCGTCAACTGCTACAACCACAAGTTTGCCTCTTTCTAGCAATGCTGTAAAGTCTCAACAGCCATCTCAGCTACTTCATCTTCAACAGCAGCATGGAATGTTACAGCCGCAACCTGCTGTGGCGACTCGTTATAAAGCCTCGTCAACTAATGCTACAATTGGTGCAAATTTTTTTCCTACCCCAGTTTATGCACAAACTCAAACTCAGAACAAAAGTTCGATTAAAGGCTCCCAGTCAAAAATCTGTGTAGCAGCCTCAGATTCTCTTGTTCATAACCCGTGTATCATAACTTCTACTGCTCCAACTCTCCAAAGTTTTTCCCAGGATCAAGGAAGAGTATTGCAGGGTCAGACCCAAATATCTTTTGGTGGAAATTACATATCGTCCATGCCACTCCAAGGGCAACAACTATTCAATAACAACCAGTCTCTTGGTAATACAGTTGCAGGAGTTCCACCTAGTGGAGCCAACTTGAAGACAAATTCCCAGGGGAGCAAGGTTAGTTCATCAGTGAACTCTTCGCAGATGCAACAAACTGAGAATTCTTCCACTGCGACTGGCCAAAAATCTTCCCCAGTTTGTGGGAGAAATGTCCCATCCATCTTGAGCTCGGGCCCCAGTCACCTATCTGAGCTGAAGTATTAG 3510 0.4584 MDRTRGRSSSMSANAFPRRRHPNIPLPPTSQEMQETRLKDNNDDDDNNSKREWTKKRRGSNSHSTEEESVGNEQDARLHSNNTASSASDHNHRGRNVIDQVMIGAIVPRRTRSASVKRPHHSWVEEQSAEDASPSSSNVSLPKKMKAIGPSSSNQEDIEIEIAELLYSLRASQNHDYSSSQKDKASDSPALSSSPAIDVVETKKVEDYSSSFCILPPNNSTPESVVIESHQPAKMEIPSSVSPRTSGVDGIESSQGPKQDAEEDSLSPGCGCGDAVDGKLESKLVVDKHDCASTIRTCDDVLEGNGKPKFEIDLMAPPPVTFSSEWGNLSRGEDRNKVEDKVESLSKKEQTLGEIEEVKMKVDLEKPNGHHDLATNHELGELGRNREQPTPTATNAKLEKTGLLHFFTSSAQCSSMSLSVDVSERPSGFSPLGYVPPMGTAMKTDKTTGLLTAPQHGNFVLSQPRPKRCASHGYIARNIFMHQQCTKMNTLLPSTIGSGSMCDAKLSKVHSAESVVVGKQFHKQSPGVSHSSAPEKGWTATSDFSVAAIKKSSGPANPVDVTQMKQLMLQQGQHPGSSANIVHGPAFLIPPGQHQASVIPGTSPAGGVNNASNASLSNKFQSSPGVSVGGATLPAVAATMSFSYSNLTANDAPYMTIVPNGGYPFPFSTPLGPSAAIRGASPAQSTPILNGPLYSSQIFHPLQYPQQHPHSQTLVQPSSYLNGSTSSVSSSSHKQSQGMQGNNNHILSSTTMQLQQSQKQHTSQSHLRKHETGIAGDNSPFAASGTAYSQKNGFGQNFPIPVQPLGLSLTPSTTSDSVGGNSGNFGDKQQQTLMGGLEHIPSQPHAISFAAYNGTNVPSNLNFSTMAQNPVIFQSLPDIAWQGYHAGSASHATQQKMYPIIEGNSGDSSSYRDDEKATSGKPSTNGPTTLVFDNSAKNLNLVSSPMNGNWPSRSISSTATTTSLPLSSNAVKSQQPSQLLHLQQQHGMLQPQPAVATRYKASSTNATIGANFFPTPVYAQTQTQNKSSIKGSQSKICVAASDSLVHNPCIITSTAPTLQSFSQDQGRVLQGQTQISFGGNYISSMPLQGQQLFNNNQSLGNTVAGVPPSGANLKTNSQGSKVSSSVNSSQMQQTENSSTATGQKSSPVCGRNVPSILSSGPSHLSELKY* 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0111 1169 MobiDBLite consensus disorder prediction 128 156 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 36 74 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 1105 1162 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 900 931 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 75 91 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 173 195 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 1 156 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 707 762 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 707 788 - -
Vra3g0111 1169 PANTHER PROTEIN TIME FOR COFFEE 1 1169 IPR039317 GO:0042752
Vra3g0111 1169 PANTHER TIC-LIKE PROTEIN 1 1169 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 219 269 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 1105 1169 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 235 253 - -
Vra3g0111 1169 MobiDBLite consensus disorder prediction 173 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0111 Vra-Chr3 1220177 1225599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0111 - - vra:106757719 2214.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0111 3 1220177 1225599 Vra8g1131 8 26139051 26144552 PCT