Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1123 ATGGAGACCCTTTTTGTTGTTGAGCAGCATAAGAACCAATACTACAGCAGGTCGAAGTCGCAGGGTCATGCTCGATTCGGGGGTTCACCTTCCAGGGGCTTTAGGGATATCAATTGCAGGACTTTTGATTCTGGGAGGACAGGTATATTGCCATCTCCTTTGAAATCTCATGGTTCCCCTAAATCACCACCTAACTCTGACTACAAAACGTTAGGGAAAGTAAAAGTTACTCCCAAGAGCACCCCAATTCCCATAAATGGTGTAGCTTGTAGGAGAAAAGAGGGCGAAGATGTCCCTGGTGGTGGTGGTGATCTTTTGCTTTCTGAGTTATGGGCTGGTCCTACCTACTCAAATTCTCCACCTCCTAGTTCCTTACCAATTCCCAAGTTTTCTGTCAAACCAAAGAGGACTGTGTCCCTTAATCTTCCTGGTTCCTCCCCTGAGATTGAAATGCGCCCGGTGGCTAAATCTGCACCCTCTTCCCCTGGCAGGGAGCATTTGGATTTGCCTTTTACTAGGGATCTCTTTGTTAATGCTGATTCTGCTACGAAGACCCTGTGTCGGATTCTTAATCTTAACATCAATGACTACTGA 594 0.463 METLFVVEQHKNQYYSRSKSQGHARFGGSPSRGFRDINCRTFDSGRTGILPSPLKSHGSPKSPPNSDYKTLGKVKVTPKSTPIPINGVACRRKEGEDVPGGGGDLLLSELWAGPTYSNSPPPSSLPIPKFSVKPKRTVSLNLPGSSPEIEMRPVAKSAPSSPGREHLDLPFTRDLFVNADSATKTLCRILNLNINDY* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1123 197 PANTHER BNAA03G57290D PROTEIN 1 196 - -
Vra8g1123 197 Pfam Proline-rich nuclear receptor coactivator motif 111 130 - -
Vra8g1123 197 MobiDBLite consensus disorder prediction 16 72 - -
Vra8g1123 197 PANTHER - 1 196 - -
Vra8g1123 197 MobiDBLite consensus disorder prediction 142 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1123 Vra-Chr8 25993590 25996154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1123 - - gmx:100791409 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1123 8 25993590 25996154 Vra8g1123 8 25993590 25996154 ECH
Vra3g0120 3 1380243 1382713 Vra8g1123 8 25993590 25996154 PCT