Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0120 ATGGAGACACTTGTTGTTGTGGCGCATCACAGGAACCAATGCTACCCCCGGTCGGAACCCCAAGACCACGCTGAGTTTGGTTCCTCTTCACCTTCGAGAGACTTTAGGGGCATAAATTGCAGAACTTTCCAAACGGGATGTGGTATTCTACCAACCCCACTCAATTCTCACTCTTCACCGTTAACTAAACACCCCAAAACGCCGATAGCTCCTTCAAACACTAACAAAACCCGTTGCAGAACCACTCCTAATAGCGCCCCAGTTCCCATCGATCACAGAAAGGGGAAAAGTTTCGGCCAGTATGTTTCTGATAGGGGCATTTTGCTTTCTGAACTTTGGGCTGGGCCTACATATTCAAATTCTCCACCACCCAGTTCCTTGCCTATTCCCAAATTTTCTGTAAGGCCGAAGAGGAGTGTGTCCCTCGATCTCCCTGGTTCTTGTCCTGAAATTGAATTGCAGTTAAATGCTAGTTCTGCCCCTTCCTCCCCGCGCGGGGAACATTCTCCATGTGCCAGAGACCTCTTTGATTCGCCGACGAAGGCGTTGCGTCGCATCCTCAATCTTAGCTTGGATGATGAATGA 585 0.4923 METLVVVAHHRNQCYPRSEPQDHAEFGSSSPSRDFRGINCRTFQTGCGILPTPLNSHSSPLTKHPKTPIAPSNTNKTRCRTTPNSAPVPIDHRKGKSFGQYVSDRGILLSELWAGPTYSNSPPPSSLPIPKFSVRPKRSVSLDLPGSCPEIELQLNASSAPSSPRGEHSPCARDLFDSPTKALRRILNLSLDDE* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0120 194 PANTHER - 1 194 - -
Vra3g0120 194 MobiDBLite consensus disorder prediction 57 96 - -
Vra3g0120 194 MobiDBLite consensus disorder prediction 156 175 - -
Vra3g0120 194 PANTHER BNAA03G57290D PROTEIN 1 194 - -
Vra3g0120 194 Pfam Proline-rich nuclear receptor coactivator motif 113 132 - -
Vra3g0120 194 MobiDBLite consensus disorder prediction 57 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0120 Vra-Chr3 1380243 1382713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0120 - - gmx:102659741 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0120 3 1380243 1382713 Vra3g0120 3 1380243 1382713 ECH
Vra3g0120 3 1380243 1382713 Vra8g1123 8 25993590 25996154 PCT