Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1122 ATGCTGCTCAGAAACAGATCAAGAGCTGTCACCAAACCAAGTTTGATGGGTGATCACAGCTCCCAGCCAAGTCCAAATCAGAGTTACAGAAGAACCATTCCTTCTTTGTTTTCACCAAAATTTCGTGACTTCTCAATCAAGTGTCTCTCAGGAGCTGAGGCTTTGAGAAGCCCCACCTCCATTCTTGACACCAGAGCCTTAACCCCATTTGGGAGTCCTTTCTCACATGAGAAAAAGATCGAGACTTTTGCCCCCCCAAGAGTACCCTCTGAAAACAGAACTTCATGGGACTCAAAAGCCATTGGTCTTGCTCTTGTTGGTGCACTTAAAGATGAACCTCTTCTTCACACCGCAGCTAAACCATGTACTGGAACTGTTCTCTTTGGGGTCAAAATCCCTCCACTGCCACTACCACTACCACCTTCATCTTCTGAATCAACTAAAACATGTGCCAAAACCAAGGATTCGCAAAAGCAAACAAAGGATTCTCCATTATCGGTTGCAACAGGTGTTATGAGTTTGAGTGAGATGGAACTTTTTGAAGAGTACACGTGTGTGATATCTCATGGACCTAATCCTAGAACAACACATATATTCGACAATTGTATCGTGGAAAGTTACTGTTCCCTCCCCAATAACACTCTCTCACCTTCACTCAATTTTCTTAGCTTTTGTCACACTTGCAAGAAGCATCTTCAGCAGACAAATGACATTTTTATTTACAGAGGAGAGAAAGCCTTCTGCAGCAAAGAATGTCGTCAGGCAGAAATGGTACTAGACGGAGCAGAAATTTCAGAATTTGACGAGTTGCATAGCACAGCCTGA 825 0.4339 MLLRNRSRAVTKPSLMGDHSSQPSPNQSYRRTIPSLFSPKFRDFSIKCLSGAEALRSPTSILDTRALTPFGSPFSHEKKIETFAPPRVPSENRTSWDSKAIGLALVGALKDEPLLHTAAKPCTGTVLFGVKIPPLPLPLPPSSSESTKTCAKTKDSQKQTKDSPLSVATGVMSLSEMELFEEYTCVISHGPNPRTTHIFDNCIVESYCSLPNNTLSPSLNFLSFCHTCKKHLQQTNDIFIYRGEKAFCSKECRQAEMVLDGAEISEFDELHSTA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1122 274 MobiDBLite consensus disorder prediction 138 165 - -
Vra8g1122 274 Pfam zinc-finger of the FCS-type, C2-C2 217 261 IPR007650 -
Vra8g1122 274 PANTHER FCS-LIKE ZINC FINGER 8 2 263 IPR044593 -
Vra8g1122 274 MobiDBLite consensus disorder prediction 1 32 - -
Vra8g1122 274 MobiDBLite consensus disorder prediction 14 32 - -
Vra8g1122 274 ProSiteProfiles Zinc finger FLZ-type profile. 220 264 IPR007650 -
Vra8g1122 274 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1122 Vra-Chr8 25989423 25991134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1122 - - gmx:100811607 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1122 8 25989423 25991134 Vra8g1122 8 25989423 25991134 ECH
Vra3g0121 3 1393285 1395570 Vra8g1122 8 25989423 25991134 PCT