Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0121 ATGCTGCTGAGGAACAGATCAAGAGCAGTGAGCAAGCCAGGTTTGATGGCTGATCATAGCTCTCAACAATCACCCAGTCAAAACTATGCTAAAACTATACCCTCTCTGTTTGGGTCACCAAAATTCAGAGATTTCACCAACAAGTGTCTCTCCTCTGGAACCGAGGCCTTAAGGAGCCCAACTTCGATTCTTGATGCCAGAGCATTATCCCCTTTTGTTTTTGGAAATCCATTCTCAACTCCTCCAAACAAAATCAGAACTTCCTGGGACAAGCCTGATTCAAAGGGTCTTGGTCTTGCTCTTGTTGGTGCTTTCAAAGATGAGGATAACCCGATTCGTGACCATTCTGAGACCAACAAGGGAAACGTTCTGCTTAGAGTGAAAATCCCATTTGAATCTCAGACGTGTGCTGATGATTTTGGAACCAAAACCAAGGATTCAAAAAACTCATCAGGGTCAGGAAGTTTTGCAAAGGATGATTGTGCTTCGACATGTGTGAGGGCTCTGTCTTGGAGTGAGATGGAGCTTTCTGAGGAATATACATGCGTGATATCCCATGGACCTAACCCAAAAACCACACACATATTCAATAATTGCATTGTGGTGGAGACCTATTATTCTCTTCCCCAAAACCAAAACTCTCATTCTGCTGCCTCCTCAAATTTCCTCAGCTTCTGTCACACTTGCAAGAAACATCTTGACCAGACCAAGGACATCTTTATTTATAGAGGAGAGAAAGCTTTCTGTAGCAGGGAGTGCCGCCACCAAGAAATGGTGCTGGATGGAATAGAAAATTTAGAGTTTGAAAGCAATGGCTTTTCTTGA 825 0.4339 MLLRNRSRAVSKPGLMADHSSQQSPSQNYAKTIPSLFGSPKFRDFTNKCLSSGTEALRSPTSILDARALSPFVFGNPFSTPPNKIRTSWDKPDSKGLGLALVGAFKDEDNPIRDHSETNKGNVLLRVKIPFESQTCADDFGTKTKDSKNSSGSGSFAKDDCASTCVRALSWSEMELSEEYTCVISHGPNPKTTHIFNNCIVVETYYSLPQNQNSHSAASSNFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLDGIENLEFESNGFS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0121 274 MobiDBLite consensus disorder prediction 1 28 - -
Vra3g0121 274 Pfam zinc-finger of the FCS-type, C2-C2 213 261 IPR007650 -
Vra3g0121 274 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 265 - -
Vra3g0121 274 PANTHER FCS-LIKE ZINC FINGER 8 2 265 IPR044593 -
Vra3g0121 274 ProSiteProfiles Zinc finger FLZ-type profile. 221 265 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0121 Vra-Chr3 1393285 1395570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0121 - - gmx:100788456 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0121 3 1393285 1395570 Vra3g0121 3 1393285 1395570 ECH
Vra3g0121 3 1393285 1395570 Vra8g1122 8 25989423 25991134 PCT