Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1115 ATGGCGACTTTGTCACATGCAAACTCTAGGAGAATGTATTCATGGTGGTGGGACAGCCACATAAGCCCTAAAAACTCAAGATGGCTCCAGGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCTTTTGCAAGGAGAGCAGAAATGTATTATAAAAAACGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTACAGGGCATATCGAGCGTTGGCTGAGAGATATGATCATGCAACTGGAGTTATCCGCCATGCCCATAAGACCATGTCTGAGGCATTTCCTAATCAAGTTCCTATGATGCTGACAGATGATTTACCTACAGTTTCTCCTGAGGCAGAGCCACACACTCCAGAAATGCGCCACTCTTCACGTTCCTTTCTTGATCCAGATGAACCACAAAAGGAGGCTTCTGCTCACTTCCATGTTATAAAAAAGAATGGTGGTTATTCTGGCGAACCTGATTCTTCTTTGAGCAAAACAGGTTTGAAACAGCTCAATGATCTCTACATCCCTGGAGAACCGGAAAATCTTACACAGTTTGCAGAAAGGAATGCTAGAAGGGGGCTCAATTTTTTCGAGACACAGGAGAGTAGTGAGCTAAACAATGGAAGCAACAATACTAGGTCTCACGTCTCGTCTGAGTCTGAACGTGTGACAAAAGCTGAGACAGAAATTTTGGCCTTGAAGAAAGCCATTGCAAAATTAGAGGAAGAAAAGGAAGCTGGCTTGCTTCAGTATCAACAGTGTTTAGAGAAGCTGTCTAATATCCAGTTAGAATTGTCTAGCGCACAAGAGAATTCTCAAAGACTCGATCAGCGAGCAAGTAAAGCTGAAGCTGAAATTCAGTCCTTGAAGGAAACCCAAATTAAATTACAGGCTGAAAGTGAAGATAGTCTTCTTCAGTATCAGGAGTGCTTGGAGAAAATAACAAAGCTAGAGGAAAATATTTCTTCTGCGCAGACAGAAGCTGGAGAACTTAATGAAAGAGTTAACAGAGCAGAAAATGAAGCTGAATCCCTGCAGCAGGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTATCATTGTTCAATATAAACATTGCTCGGAGACACTATCAAAATTGGAGGAGAGATTAGAAGAAGCCGAGGAAAATGCAAGAAGGACTAAGGAGCATGCCACTGTAGCTGAAAATGAAATTGGGGCCTTGAAACTACAAGTTACTAAACTTAATGAAGAAAAGGAAGAAGCTGCTCTCCGTTATCAGCAATGCTTGGAGATGATTTCGGGTCTAGAATATAAACTCTCTTGTGCTGAAGAGGAGGTACGTAGGCTAAATTCCAAGTTAGATGATGAGGTGGAAAAATTACAGAGTTCTGAAAAGAAGTGTCTTCTCCTGGAGACATCAAATCACAATCTGCAGTCTGAGTTACAATCTTTGTCGCAACAAATGGGGTCTCAAAGTGAAGAACTTAATGAGAAGCAGAAAGAATTGAGTAGACTATGGGGTTGTATACAGGAGGAGAGATTGCGCTTCGTTGAGGCTGAAACCGCTTTCCAAACTCTTCAGCAGTTACATTCTCAATCTCAGGAAGAGCTCAGATCTCTTGCTGCTGAACTTCACAGTAAAGTGGATATACTGGGGAACGTGGAATCACGTAAGCAAGCTTTAGAGGATGAAATACACAGGGTCAGTGAGGAAAACAAAGTTCTAAATGAGGTCAAAATTTCTTCATCTTTGTCAATAAAAAATCTGCAGGATGAGATTCTGAATTTGAGGGAGACAATAGAGAAACTCGAACAGGAGGTGGAGCTGCGAATTGATCAAAGAAACGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATTTGAATAAAAAACATGAAGCCATGATGGAGGAAGTCAGGTCAACTGACTTAGATCCACAGTGCTTTGGACCATCTGTGAAAAAATTGCAAGATGAAAACTTAAAGCTGAAGGAAACATGTGAGGCTGACAAAGGAGAGAAAGAAGCTCTTTTGGTAAAATTAGAAACCATGGAGAAAATTCTGGAGAAAAATACTGTCTTAGAAAATTCCCTTTCAGACTTGAATGCTGAGCTGGATAGTGTCAGAGGAAAGGTAAATGTGTTGGAAGAAACATGTCAGTCTCTACTAGTTGAGAAATCCAATCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAGTTACAATCCACAACTGAAAAGCTGGAGAGGCTCTCAGAAAAGAGCAACCTATTGGAAAATTCATTATTTGATGTGAATGCTGAACTTGAAGGGTTAAGGATGAAGTCCAGGGTGTTAGAAGATACATGCCAGTCACTTGACCATGAGAAGTCCAGTATCTTTCAAGAGAAAGAAACCTTAGTTTCACAGATGAACATCACTCATCAAACACTGAAAGATCTTGAGAAACTGCACAGTGAATTGGAGTCAAAGCATTTGGAACTAAAAGGAGAAAGAGAGTCTGCACTTCAAAAGGTAGAAGAACTTCTAGTTTCCCTATATTCTGAGAGGGAAGAGCATTCCAGAGTTTTGAAATTGAATGAAGATGAATTGGCTGAGAAGGAATTACAAATTCATATTCTACAAGAAGATACGAATTGCAAGAAAAAGGATTATGAGGAGGAACTGGACAGAACTATACGTGCTCAAATTGAAATTTTCATCTTGCAGCAATGTATTGACGATCTGGAAAAAAAGAACTTCTCCATTCTGGTTGAGTGTCAGAGACTCTTGGAGGCTTCCAAAATGTCAGACAGAATGATATCTAAATTGGAGATTGAGAATGTTCAAAAGCAGGTTGATGTGAATTCTTTGTCTGAGAAAATTAAAATACTAAGGGTTGGGTTGATTCAGGTGTTGAAGACTCTTGACCATAACAGTGGGCATTTCTGTGAAGATATGCTTGAAGAAGACCAAATGCTTTTGAACCAGATATATGAAAAACTTCAGGACAGGCAGAAATCTTTTGACACAATTTTCAATGAAGGCCAAAAAATGGCCATCGAGAATTCAATTCTGATTACATTCCTTGAGCAGTTGAAACTAAAGGTAGAAAATCTTGTGACACAAAGAGATGACCTTGATGAACAGTTCAGTATCCAGTCTCGGCAGTTCTTGGCATTGCAAATAGAGGTTCAAGAGATACTGGAGAAGAACCAAGAGTTGAAGTTAACAATAAGCAAAGGAGAAGAGAGAATGGAAGTAATGACAGCTGAAATAGGCAACCTAGAGAAGAAGCTGTCAGACATGGAAAATAATCACAACAATTTACAGGAGGATAGTCACAAAATATTGGAAGAGAAGAAGTCCTTGATGAGAAGTTTTCTAGATCTGGGTGAAGTGAAAAGTAACTTGGAAGAAGAAATATGTTTCATGATCCATGAGACAATAGCTCAGTCTAATATTTCCCTGATTTATGAGAATATTATCTTTGAAAAACTCCTGGAACTTAAAGAGCTAGGTGAGGATCTTGATAAACATTGTTCAGCAAATAATGACCTCAAGGAGAGATTAAAAGTTATGGAGGAAAAGTTAGAGAATGCAGAAATGGAAAATTCACATCTTAAAGAGTCATTTATAAAGTCAAATGTTGAACTGCATTTAGTTCAATCTATAAATGATGAATTAAGTTGTCAGATTAGGGATGAAAGGGAAATGTTGAATCATAAGGAAAATGAGCTTTTGAAAGCAGCTGAGATGTTTCATGTTTTACATGCTGAGAAAACAGAAGTGCAAAGAATGGTGGAAGATCTGAAGATTAAGTATGATGAGGCAAGGGTGATGCTGGAAGAACAGGCTAATCAAATTTTAAAATTGTCCTCAGACAAGGACCGTCAAGATGAAGAGGTAATTTGCCTGTGCAAAGTGAACCAGAAGTTGGAGTCTGAAATAGGGCATCTACGTCAAGAGCTTGGAGAAACTAAACTGAGGGAAAATAAGCTAAGTTATGAAGTACTTAAGGGAAGAAATGAGATTGAACAATGGGAAACTCAGGCTTCAAAACTCTTTGCTGAGCTGCAGATTTCTGCTGTGAATGGAACATTATTTGAAGGAAAGGTCTCTGAGCTAGCTGATGCTTGTGAGAATCTTGAACACAGAAACTACTCCAAAGACATGGAAAGCGAGCATCTGAAAGAAAGAGTTAGCAAGCTGGAAATTGAAAATGGAAGACTATCTGGTCGATTAGCTGCTTATGTCCCTGCTGTCAGTGCTTTGAATGATAGTATAACAGCTCTGGAGATGCAGACTCTTTCACATGCAAAACCTGATGACTGTGAAGAAACAAAGGTTAAAGTATTGGTGGGTAATGAATCCACTAAAGATGGTCAACAAACAGACGAAGATAAGACTGTTATGGCACCAGATGCACTCCCTGGCTTCCATGACATGCAGAGAAGGATCAATGCTATTGCAGTAGTAGTAAAGCAGTTAAATGAAAGTTTCAAACTCAAGAATGAAACTAGAGAGATTCAAGAGTTAAAATCTGGAATTACCCAATCAAGCAAGCATGTTACTCAAGACCAAGGAAAGTCCCCGGTTACAGAGATCGAAGTTTTGCCTAAGGACATCATGCTAGATCAAATATCTGAATGTTCATCGTATGGGATAAGTAGGAGGAGAGAAATTCTTGAGGCTGATGATCAAATGCTTGAGTTGTGGGAAACAGAAGATAAGGATGGCAGTATCGGAAAGCAAGTCGAAAAGACACAAAGGATGGCTTCTGAAGCTGCAGGCAATCAACAAAGAGGAACAACCAAGGAACCCAAAAATAAATATCCTTCAAAAGACTCCTTGGTGGAAAAAGAATTGAGTGTGGACAAGTTAGAGATCTCAAGAAGATTGACACTGCCACGGGATGAAGGGAACCAAACGAAGATTTTAGAGAGACTCGATTCTGATGCACAGAAGTTGACAAACCTTCAAATCACTGTACAAGATTTGATGAAGAAGGTAGAGGTTAATGAGAAGAACACAAAAGGAAAAGGTGTTGAGTTTGATGAAGTAAAAGGGCAACTTGAAGTATCCCAGGAGACCATCACAAAGTTGTTTGACACCAACAAGAAGTTGATGAAGAATGTGGAAGAGGGTACCTTGTCATCTGTCGGGAAGAGTGCAGGAGAGTTAGATGAAAATGGAAGTGTGAGCAGAAGAAGAGTCTCAGACCAGGCAAGGAGAGAATCAGAAAAGATAGGACAAGTGCATTTGGAGGTGCAGAGGTTGCAGTTTCTACTGCTGAAACTTGGTGATGGAAAAGAAAGCAAAGAGAAAACGAAAACCAGTGATCGAAATCCAAGAGTGCTTTTGCGAGATTATCTCTATGGTGGGACGAGAGGCAACATCCATAAGAAGAAAAAGCTACCATTTTGTTCATGTATGCGACCTCCCACCAAGGGAGATTGA 5445 0.3969 MATLSHANSRRMYSWWWDSHISPKNSRWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHKTMSEAFPNQVPMMLTDDLPTVSPEAEPHTPEMRHSSRSFLDPDEPQKEASAHFHVIKKNGGYSGEPDSSLSKTGLKQLNDLYIPGEPENLTQFAERNARRGLNFFETQESSELNNGSNNTRSHVSSESERVTKAETEILALKKAIAKLEEEKEAGLLQYQQCLEKLSNIQLELSSAQENSQRLDQRASKAEAEIQSLKETQIKLQAESEDSLLQYQECLEKITKLEENISSAQTEAGELNERVNRAENEAESLQQDLARVEAEKEAIIVQYKHCSETLSKLEERLEEAEENARRTKEHATVAENEIGALKLQVTKLNEEKEEAALRYQQCLEMISGLEYKLSCAEEEVRRLNSKLDDEVEKLQSSEKKCLLLETSNHNLQSELQSLSQQMGSQSEELNEKQKELSRLWGCIQEERLRFVEAETAFQTLQQLHSQSQEELRSLAAELHSKVDILGNVESRKQALEDEIHRVSEENKVLNEVKISSSLSIKNLQDEILNLRETIEKLEQEVELRIDQRNALQQEIYCLKEELNDLNKKHEAMMEEVRSTDLDPQCFGPSVKKLQDENLKLKETCEADKGEKEALLVKLETMEKILEKNTVLENSLSDLNAELDSVRGKVNVLEETCQSLLVEKSNLAAEKATLFSQLQSTTEKLERLSEKSNLLENSLFDVNAELEGLRMKSRVLEDTCQSLDHEKSSIFQEKETLVSQMNITHQTLKDLEKLHSELESKHLELKGERESALQKVEELLVSLYSEREEHSRVLKLNEDELAEKELQIHILQEDTNCKKKDYEEELDRTIRAQIEIFILQQCIDDLEKKNFSILVECQRLLEASKMSDRMISKLEIENVQKQVDVNSLSEKIKILRVGLIQVLKTLDHNSGHFCEDMLEEDQMLLNQIYEKLQDRQKSFDTIFNEGQKMAIENSILITFLEQLKLKVENLVTQRDDLDEQFSIQSRQFLALQIEVQEILEKNQELKLTISKGEERMEVMTAEIGNLEKKLSDMENNHNNLQEDSHKILEEKKSLMRSFLDLGEVKSNLEEEICFMIHETIAQSNISLIYENIIFEKLLELKELGEDLDKHCSANNDLKERLKVMEEKLENAEMENSHLKESFIKSNVELHLVQSINDELSCQIRDEREMLNHKENELLKAAEMFHVLHAEKTEVQRMVEDLKIKYDEARVMLEEQANQILKLSSDKDRQDEEVICLCKVNQKLESEIGHLRQELGETKLRENKLSYEVLKGRNEIEQWETQASKLFAELQISAVNGTLFEGKVSELADACENLEHRNYSKDMESEHLKERVSKLEIENGRLSGRLAAYVPAVSALNDSITALEMQTLSHAKPDDCEETKVKVLVGNESTKDGQQTDEDKTVMAPDALPGFHDMQRRINAIAVVVKQLNESFKLKNETREIQELKSGITQSSKHVTQDQGKSPVTEIEVLPKDIMLDQISECSSYGISRRREILEADDQMLELWETEDKDGSIGKQVEKTQRMASEAAGNQQRGTTKEPKNKYPSKDSLVEKELSVDKLEISRRLTLPRDEGNQTKILERLDSDAQKLTNLQITVQDLMKKVEVNEKNTKGKGVEFDEVKGQLEVSQETITKLFDTNKKLMKNVEEGTLSSVGKSAGELDENGSVSRRRVSDQARRESEKIGQVHLEVQRLQFLLLKLGDGKESKEKTKTSDRNPRVLLRDYLYGGTRGNIHKKKKLPFCSCMRPPTKGD* 1815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1115 1814 Coils Coil 687 770 - -
Vra8g1115 1814 Coils Coil 1165 1206 - -
Vra8g1115 1814 PANTHER PROTEIN NETWORKED 4A 1 1814 - -
Vra8g1115 1814 MobiDBLite consensus disorder prediction 1725 1743 - -
Vra8g1115 1814 Coils Coil 1221 1241 - -
Vra8g1115 1814 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Vra8g1115 1814 MobiDBLite consensus disorder prediction 1584 1611 - -
Vra8g1115 1814 Coils Coil 936 956 - -
Vra8g1115 1814 Gene3D - 681 861 - -
Vra8g1115 1814 Gene3D - 308 475 - -
Vra8g1115 1814 Coils Coil 1652 1672 - -
Vra8g1115 1814 MobiDBLite consensus disorder prediction 1715 1743 - -
Vra8g1115 1814 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Vra8g1115 1814 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1814 - -
Vra8g1115 1814 Coils Coil 586 645 - -
Vra8g1115 1814 Coils Coil 313 501 - -
Vra8g1115 1814 MobiDBLite consensus disorder prediction 206 223 - -
Vra8g1115 1814 Coils Coil 551 578 - -
Vra8g1115 1814 MobiDBLite consensus disorder prediction 206 230 - -
Vra8g1115 1814 Coils Coil 229 305 - -
Vra8g1115 1814 Coils Coil 1060 1115 - -
Vra8g1115 1814 MobiDBLite consensus disorder prediction 125 147 - -
Vra8g1115 1814 SUPERFAMILY Tropomyosin 399 645 - -
Vra8g1115 1814 Coils Coil 1305 1325 - -
Vra8g1115 1814 Coils Coil 1263 1297 - -
Vra8g1115 1814 MobiDBLite consensus disorder prediction 119 147 - -
Vra8g1115 1814 Coils Coil 806 840 - -
Vra8g1115 1814 Coils Coil 656 676 - -
Vra8g1115 1814 Coils Coil 852 897 - -
Vra8g1115 1814 Coils Coil 1025 1045 - -
Vra8g1115 1814 Coils Coil 523 543 - -
Vra8g1115 1814 SUPERFAMILY Tropomyosin 216 419 - -
Vra8g1115 1814 MobiDBLite consensus disorder prediction 1587 1602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1115 Vra-Chr8 25852073 25859831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1115 - - gmx:100810726 2295.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1115 8 25852073 25859831 Vra8g1115 8 25852073 25859831 ECH
Vra3g0129 3 1459025 1466710 Vra8g1115 8 25852073 25859831 PCT