Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0129 ATGGCGGCTCTGTCCCATGCTGATTCTAGAGGAATGTATTCATGGTGGTGGGACAGTCACATTAGCCCCAAGAACTCGAAATGGCTCCAAGAGAATCTGACTGATATGGATTCCAAGGTGAAGCAAATGATCAAGCTTATTGAAGAAGATGCAGATTCCTTTGCAAGGAGGGCAGAAATGTATTATAAGAAACGGCCAGAGCTCATGAAATTAGTTGAAGAGTTTTATCGTGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTTATTCGTCAGGCCCATCGTACCATGGCTGAAGCATTTCCTAATCAAGTGCCTCCTGCATCAGCAGATGATTCACCTGCAGTTTCTTACATGGAGACTGAGCCACATACACCAGAGACACTCACCTTCTCCCGTTCATTTCTTGACTCAGATGAATTGCAAAAGGATGCTTCAACTCATTTCCATGCCATCATAAGAAATGGATCTTATACTGATGAAACTGATTGTGGTATAAGCAGAAAGGGGTTGAAACAGCTCAACGATCTATTTATGTCTGGAGAACCAAAAGATCATGCAAAGTCTTCAGAAGGGCGTGTTCGAAGGGGGCTGAATTTTCTTGACGTAGAAGAGATTAATGGGCAAGACAATGAAAGCCAAGATAGTAGGAGTCAAGTCTTATCTGAGTCTGAACGGATGACAAAAGCTGAGACAGAAATTTTGGCCTTAAAGAAAGCCCTGTCTAACTTAGAAAGTGAAAAGGAGGCTGGCTTGCTTCAGTATCAGCAGAGTTTGGAGAGATTGTCTAATCTGGAATCAGAAATGTCTCGTGCAAGAGAGAATTCTCAAGGACTTAATGAACGAGCAAACATAGCTGAAGCTGAAGTTCAAACTTTGAAGGAAGCCCTTAATGAATTACAGGCTGAAAGAGAAGTTAGTCTTCTTCAGTACCAGCAATGCTTGGAGAAAATATACAATCTGGAGAATCACATTTCTTCTGCCCAAAAGGATGTAGGAGAACTCAGTGAACGAGCTACTAGAGCTGAAACTAAAGCTGAATTCTTAAATCAAGACCTTGCTAGAATAGAAGCTCAAAAGGAAGCTGCCCTTGCTCAATATAACCAGTCCTTGGAGGAGTTGTCAAAACTAGAGGAGAGACTCATACAAGCTGAAGAGAACGCAAGGATATTTAAAGAACAAGCTGATGATGCAAAAAATGAAATTGAGAGCATGAAGTCAGAAATTGCTAAACTTACTGCAGAGAAGGAAGATGCAGCTCACTGTTATCAACAATGCTTAGAGATAATTTCCAGTTTGGAGCATAAACTCTCTTGTGCCCAAGAGGAGGTGTATAAGCTAAACTGCAAGATAAATGATGGGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTTTTCTCTTGGAAACATCTAATCAGACTTTGCAATCTGAATTGCAGTCTTTAGCACAGAAGTTGGGATCTCAGAGTGAAGAACTTAGTGAGAAGCAGAAAGAATTGGGTAAACTCTGGACTTGCATACAAGAGGAGAGATTGCGATTCATCGAGGCTGAAGCTGCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCTCAGGAAGAACTAAGATCTCTTGCCACCGAGCTTCATGGTAAGGCTGAAATTCTGGAGAATATGGAATCCCACAAGCAGGCTTTGGAGGATGAAGCTCACAAGGCCAAAGTGGAAAACAAAACTCTAAATGAGCTTAAATTATCTTCATCTTTGTCTATAAAAAAAATGAAGGATGAGATAATAAATTTGAGGGAGATAATAAAGAAACTTGAACTGGAGGTTGGACTGCAGGTAGATGAAAGAAATGCTCTCCAGCAAGAAATTTACTATCTTAAAGAGGAGCTTAATGATGTGAATAAAAGACATGAATCCATTATGGAGGATGTCAGATCAACTGACTTAGATCCTCAGTGCTTTGTCTCTTCTGTGAAGAACTTGCAAGATGAGAACTCGAAGCTGAAGGAAACATGTGAAACCTACAAAGATGAGAAAGCAGCTCTAAAGGAAAAAGTGGAGACCATGGAGAAGCTTTTAGAGAAGAATTCTGTTTTGGAGAGGTCTCTTTCAGATTTGACTGTGGAGCTTGAGAAGGCTAGAGGAAAGGTAAAGGTATTGGAACAAACTTGCGAATCTTTTCTTGGGGAGAAAGCCACTCTTGCAGCCGAGAAAGCCACCTTGTTTTCTCAGTTACAAACCACAGCTAAGCAGCTCGAAAAACTCTCAGAAAAAAACAACCTTTTAGAAAATTCATTATGTGACGTGAATGCTGAGCTTGAAGGATTAAGGATAAAGTCAAAGATTTTAGAAGACTCTTGTCTGTTGCTAGACCATGAGAAGTCCAGTCTAAACTCTGACAAAGAAACCTTAGTTTCACAATTCAACATCACTCATCAAACTCTGAAAGATCTTGGGAAACAACACAGTGAATTGGAACTGAAGCATTCTGAATTGAAAGCAGAAAGGGAATCTGCACTTTTAAAGTTGGAAGAGCTACTTGTTTCCTTATATGCTGAGAGGGAAGAACATTCCAGAATTGTGCAATCGAATGAATGTCACTTGGCTGAGAAGGAATTACAAATTTTCGTTCTCCAAGAAGATGCAGATTACCAGACAAAAGAATATGAAGAAGAAATGGACAGATCTGTACATGCTCAAATGGAAATATTCATCTTGCAGAGATGTATCCAGGATTTGGAGCAAAGGAACTTCTCCCTTCTAGTTGAGTGTCAGGGACTCTTGGAGGCTTCCAAACTGTCTGATAGATTGATATCTAAATTGGAGAATGACAACACTCAAAAGCAAGCTGATGTTAATTCATTGTCTGAGAAAATTAAAATACTTAGGATCGGGCTGCTTCAGGTGTTGAAGACTCTTGATGTTAACAGTGAGCCTTGGTGTGAAAATATGATTGAAAAGGATCAGGAGCTTCTGAACCACGTACATGGCAAACTTCAAGAGACACAAAGTTCTTTTGTCACAATTTTCAATGAAAGCCAGCAAGTGGCCATTGAGAATTCAGTTCTTATTACATTCCTTGGCCAGTTGAAATTAGAGGCTGAAAATATTTTGACGGAAAGAAATTCCCTAGACAAGGAGTTGAAAACCCAGTCTACACAGTTCTTAACATTGCAGGCAGAGGTACAAAAGATATTGGAGAAGAATCAGGAATTGAAGTTGACAATAAGGAAAGGAGAAGAAAAAATGGAAGTGATGGCCACTGAAATAGATAATTTATGCAAACAGCTGTTAGATTTGAAAGAGGATCACCAAAACATAAAGGAAGAAAGTTGCAAAATCTTTGAAGAGAAAAACTCCTTGATGAGAAGATTTATGGACCTGGGTGAAGAGAAAAGTAAGATGGAAGATGAAATCTGCGTTATGATTCATGAGACAATAACACAATCTAATCTCTCGCTGGTATACCAGAACATTGTCTTTGAAAAACTCCTGGCACTTAAAGAGCTAAGCAATAATCTCGACAGACTTTGTTCTGTAAATACCGACACTGAGGAGAAACTAAAAATATTGATGAACAAAATAGAAGATGTACAAATGGAAAATTCTGATCTTAAAGAGTCCTTTGCAACGTCAAGCATTGAACTAAAATTAGTTCAATCCATCAATGATCAGTTAAATTGTCAGATTAAGAATGGAAAGCAATTGTTGTCTCAAAAGGAAAATGAGATTTCGGAAGCATCAGAGATGTTTAGCACTTTACACGATGAGAAAATAGAATTGCAAAGATTGGTGGAAGTTTTGAAGAGTAAGTATGATGAAGCCAGGGTGATACTTGAAGAACAAGCTAGTCAAATTTTAAAATTATCCTCCGACAAGGATCGACAAAATGATGAGCTTGGATGCCTTGGTGGAGTGAATCGGAAGTTGGAGGCAGAAATGAGGCATCTGCGCCAAGAACTGGAAGAAATTAAAGTGAGGGAAGAGAAGCTAAGTCAAGAACTACTCAAGGGAACAAATGAGATTAAACAATGGGAAACTCATGCTGCAACACTCTATACTAGACTGCAGATTTCTGCCGTCAATGAGACATTATTTGAAGAGAAGGTCCGTGAGTTAGCCTATACATGTGAAGATCTTGAACGCAGAAGCAACTTTAAAGACATGGAAAGTGAAATGTTGAAAGAAAGAGTTTGCAAGTTGGAAGGTGAAAACGGGAAGCTTCGGGTTCAGTTGGCTGCTTATGTCCCGGCTGCCAGTGCTCTGAATGACTGCATAACATCCTTGGAGATGCAAACACTTGGGCATGCAAAACCGCATGACGATAAAGTATCAAAGGTTAAAGGTTTGGCGTATCACAAGTACAATGAAGGTGGTCAACAAACAGGTGAATATCAGAATGCTGCGGCAATAGATGCACTTCCTGATTTCCAAGACATGCAGAAAAGAGTCAATGCAATTGAAACGGCTGTTAAACAGATGAATGAAACTTTCAAAACTAAGGATGAAATGAGAGAGATTCAAGTGTTGAAATCTGGATTCAGCTGGCGCCAAGGAAATATTCAAGCGAGTAAGTATGCTACTGAAACGCATGAAGCGAAGGGGCATCGAGCTCGACCTTCTGTTGAATTGAAATCAAAGAGATCAGTGTCAGATGTCCCTGTAGCAGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAACGTCTGAATGTTCATATGGGATAGGTAGGAGAGGAACTCTTGAGACTGATGATCAGATGCTCGAATTGTGGGAAACTGCTAACAAGGATGGCGTTATCGGGCTGACAGTTGGAAAGGCGCAGAAGACAACCATTGTGCCTACTGGATACCAACAAAAGAGAACAACCAAGGAACTCAGAAGCAAATATCCATCCGTGGAGTCCTTGATTGAGAAGGAGTTGGGTGTGGACAAATTAGAGATCTCAAGAAGATTGACACTGCCACATTCACATGAAGAAGGCAACAGGAGGAAGATTTTAGAAAGACTTGATTCTGATGCTCAAAAGTTGACAAACCTAGAAATTACGGTGCAAGATTTGATGAGCAAGCTAGAAATTACTGAGAGCACAAAGGGAAAAGGCATTGAGTTCGATACGGTGAAAGGGCAGCTTGAAACTACCCAGGAAGCCATCACAAAGTTGTTTGATGCCAACAACAAGTTGAAGAAAAATGTAGAAGAGGGTACTTCATCCTTTGCTGCGAAGTATACAGCAGAATCAAATGAGAGTGGAAGTGTCAGCAGGAGGAGAGTTTCAGAACAGGCTCGGAAAGGGTCTGAAAAGATAGGACGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTACTTCTAAAGTTGAATGATGAAAAAGAAGGCAAAGGAAAGGCGATGATAGATGAACGAAATTCAAAAGTCCTTTTGCGAGACTATCTCTATGATGGGACGAGAAGAAACTACCAGAAAAAGAAGAAGAAAGCACCCTTTTGTGCATGTATGCAGCCTCCCACTAAGGGAGATTAA 5523 0.4012 MAALSHADSRGMYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPPASADDSPAVSYMETEPHTPETLTFSRSFLDSDELQKDASTHFHAIIRNGSYTDETDCGISRKGLKQLNDLFMSGEPKDHAKSSEGRVRRGLNFLDVEEINGQDNESQDSRSQVLSESERMTKAETEILALKKALSNLESEKEAGLLQYQQSLERLSNLESEMSRARENSQGLNERANIAEAEVQTLKEALNELQAEREVSLLQYQQCLEKIYNLENHISSAQKDVGELSERATRAETKAEFLNQDLARIEAQKEAALAQYNQSLEELSKLEERLIQAEENARIFKEQADDAKNEIESMKSEIAKLTAEKEDAAHCYQQCLEIISSLEHKLSCAQEEVYKLNCKINDGVEKLHSSEQKCFLLETSNQTLQSELQSLAQKLGSQSEELSEKQKELGKLWTCIQEERLRFIEAEAAFQTLQNLHSQSQEELRSLATELHGKAEILENMESHKQALEDEAHKAKVENKTLNELKLSSSLSIKKMKDEIINLREIIKKLELEVGLQVDERNALQQEIYYLKEELNDVNKRHESIMEDVRSTDLDPQCFVSSVKNLQDENSKLKETCETYKDEKAALKEKVETMEKLLEKNSVLERSLSDLTVELEKARGKVKVLEQTCESFLGEKATLAAEKATLFSQLQTTAKQLEKLSEKNNLLENSLCDVNAELEGLRIKSKILEDSCLLLDHEKSSLNSDKETLVSQFNITHQTLKDLGKQHSELELKHSELKAERESALLKLEELLVSLYAEREEHSRIVQSNECHLAEKELQIFVLQEDADYQTKEYEEEMDRSVHAQMEIFILQRCIQDLEQRNFSLLVECQGLLEASKLSDRLISKLENDNTQKQADVNSLSEKIKILRIGLLQVLKTLDVNSEPWCENMIEKDQELLNHVHGKLQETQSSFVTIFNESQQVAIENSVLITFLGQLKLEAENILTERNSLDKELKTQSTQFLTLQAEVQKILEKNQELKLTIRKGEEKMEVMATEIDNLCKQLLDLKEDHQNIKEESCKIFEEKNSLMRRFMDLGEEKSKMEDEICVMIHETITQSNLSLVYQNIVFEKLLALKELSNNLDRLCSVNTDTEEKLKILMNKIEDVQMENSDLKESFATSSIELKLVQSINDQLNCQIKNGKQLLSQKENEISEASEMFSTLHDEKIELQRLVEVLKSKYDEARVILEEQASQILKLSSDKDRQNDELGCLGGVNRKLEAEMRHLRQELEEIKVREEKLSQELLKGTNEIKQWETHAATLYTRLQISAVNETLFEEKVRELAYTCEDLERRSNFKDMESEMLKERVCKLEGENGKLRVQLAAYVPAASALNDCITSLEMQTLGHAKPHDDKVSKVKGLAYHKYNEGGQQTGEYQNAAAIDALPDFQDMQKRVNAIETAVKQMNETFKTKDEMREIQVLKSGFSWRQGNIQASKYATETHEAKGHRARPSVELKSKRSVSDVPVAEIEVLPKDIMLDQTSECSYGIGRRGTLETDDQMLELWETANKDGVIGLTVGKAQKTTIVPTGYQQKRTTKELRSKYPSVESLIEKELGVDKLEISRRLTLPHSHEEGNRRKILERLDSDAQKLTNLEITVQDLMSKLEITESTKGKGIEFDTVKGQLETTQEAITKLFDANNKLKKNVEEGTSSFAAKYTAESNESGSVSRRRVSEQARKGSEKIGRLQLEVQRLQFLLLKLNDEKEGKGKAMIDERNSKVLLRDYLYDGTRRNYQKKKKKAPFCACMQPPTKGD* 1841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0129 1840 Coils Coil 1222 1256 - -
Vra3g0129 1840 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1840 - -
Vra3g0129 1840 Coils Coil 475 502 - -
Vra3g0129 1840 MobiDBLite consensus disorder prediction 1745 1765 - -
Vra3g0129 1840 Gene3D - 228 396 - -
Vra3g0129 1840 Coils Coil 657 722 - -
Vra3g0129 1840 Coils Coil 1770 1790 - -
Vra3g0129 1840 Coils Coil 1117 1137 - -
Vra3g0129 1840 Coils Coil 814 841 - -
Vra3g0129 1840 Coils Coil 1278 1298 - -
Vra3g0129 1840 Coils Coil 587 635 - -
Vra3g0129 1840 SUPERFAMILY Tropomyosin 221 450 - -
Vra3g0129 1840 Coils Coil 1306 1333 - -
Vra3g0129 1840 PANTHER PROTEIN NETWORKED 4A 1 1840 - -
Vra3g0129 1840 Coils Coil 328 418 - -
Vra3g0129 1840 Coils Coil 1678 1698 - -
Vra3g0129 1840 Coils Coil 230 250 - -
Vra3g0129 1840 MobiDBLite consensus disorder prediction 208 228 - -
Vra3g0129 1840 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Vra3g0129 1840 Coils Coil 1476 1496 - -
Vra3g0129 1840 Coils Coil 744 764 - -
Vra3g0129 1840 Coils Coil 1026 1046 - -
Vra3g0129 1840 Coils Coil 1712 1732 - -
Vra3g0129 1840 MobiDBLite consensus disorder prediction 106 127 - -
Vra3g0129 1840 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Vra3g0129 1840 Coils Coil 258 313 - -
Vra3g0129 1840 Coils Coil 1061 1109 - -
Vra3g0129 1840 Coils Coil 937 957 - -
Vra3g0129 1840 Coils Coil 545 579 - -
Vra3g0129 1840 Coils Coil 1166 1207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0129 Vra-Chr3 1459025 1466710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0129 - - gmx:100810726 2893.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0129 3 1459025 1466710 Vra3g0129 3 1459025 1466710 ECH
Vra3g0129 3 1459025 1466710 Vra8g1115 8 25852073 25859831 PCT