Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1109 ATGGAACCCAAGTTCACAGTGAATTGTGACCGAAATGAGTTGCTCAAAACCAGAACTGGTACTCATTTGCCAGAGAGCCCAAGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCTTCTGCTCTTGATGTCTCCAAAGCCCTTGCACCTCCACTACCACCTTCTTCTTACATACCTTCCAAGCCTCCTATTATACCCTCTTCTATCACCAACTCCATTTCCGAAGAAACTTGTTCTGCTAAGTCGGAGGAGTTCTCTTTTGCTTCCTCCGCCACTTCACAGCTCGTCCTTGACCGCATTATGTCACAGTCAACTAGAGAGGATGTATCTCCATTAACGTCTGGGAGACTGTCTCACAGCAGTGAACCTTTGAACGGTGGTGCTTCGTTAACTGGAACGGACAGTCCACCAATCTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGGGCAAACAACTCCATTCATCCCTTATTCAATGGTGGACGAGCCATGAGTGGTGCTACAGGCAATGCCACTCCTTGCTCCGGACCTAAAACAGTAGGAAGATGGTTGAAAGACAGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCATAATGCTCAACTTCATGCTTCAGTTTCTGTTGCTGCCGTAGCAGCTGCAGTTGCAGCTGTCACTGCCGCAACGGCAGCCACATCTGCAGCTACCAAGGATGAGAAGATGGCCATGTCCGTTGCTTCTGCGGCCACTTTAGTTGCTGCTCAGTGTGTAGAGGCCGCTGAAGCAATGGGAGCTGAGAGAGATCACCTTGCTTCTGTGGTTAGCTCTGCCGTCAATGTCCGCTCTCATGATGATATTTCAACACTTACAGCTGCAGCTGCCACAGCTCTACGTGGGGCAGCAACCCTGAAAGCAAGAGCATTGAAGGAGGTATGGAATATTAACGCAGTGACTCCATTAGAGAGAGGAGCAGGTATAGGAATATGTGGTAAAAGCAACAACAGTAATTCTAGCACCAGTGACAGTGGGGAGATTATGAATGGTGACAATTTTTTGGGTGCATGCAACCAAGAGCTCCTTGCTAGAGGCACTGCATTACTTAAACGGACACGCAAAGGTGATCTTCACTGGAAAATAGTTTCAGTTTATATACATCGAACAGGCGAGGTAATGCTGAAAATGAAGAGCAGACACGTTGCAGGAACTATCACCAAAAAGAAAAAGAATGTTGTTTTGGATGTGTGCACAAATTTAGCAGCATGGCCAGGAAGGCATCTGGTTGATGAGGGTGAAGAAAGGAGGTATTTTGGATTGAAGACAGAAGCAAGGGGAGTCGTGGAGTTTGAATGCAGAAATCAAAGAGAATATGATATTTGGACTCAAGGGGTTTCTAGACTTCTTTCCATAGTTGCACGCAGACAAAACCTAAATGGGGTTTGA 1431 0.4619 MEPKFTVNCDRNELLKTRTGTHLPESPRVPMEFLSRSWSASALDVSKALAPPLPPSSYIPSKPPIIPSSITNSISEETCSAKSEEFSFASSATSQLVLDRIMSQSTREDVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRAMSGATGNATPCSGPKTVGRWLKDRREKKKEENRTHNAQLHASVSVAAVAAAVAAVTAATAATSAATKDEKMAMSVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDISTLTAAAATALRGAATLKARALKEVWNINAVTPLERGAGIGICGKSNNSNSSTSDSGEIMNGDNFLGACNQELLARGTALLKRTRKGDLHWKIVSVYIHRTGEVMLKMKSRHVAGTITKKKKNVVLDVCTNLAAWPGRHLVDEGEERRYFGLKTEARGVVEFECRNQREYDIWTQGVSRLLSIVARRQNLNGV* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1109 476 PANTHER AUXIN CANALIZATION PROTEIN 1 474 - -
Vra8g1109 476 Pfam Plant pleckstrin homology-like region 363 467 IPR013666 -
Vra8g1109 476 PANTHER EXPRESSED PROTEIN 1 474 IPR040269 -
Vra8g1109 476 MobiDBLite consensus disorder prediction 105 139 - -
Vra8g1109 476 Pfam Auxin canalisation 24 319 IPR008546 -
Vra8g1109 476 MobiDBLite consensus disorder prediction 105 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1109 Vra-Chr8 25763514 25767280 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1109 - - gmx:100782024 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1109 8 25763514 25767280 Vra8g1109 8 25763514 25767280 ECH
Vra3g0133 3 1509818 1514710 Vra8g1109 8 25763514 25767280 PCT