Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1092 ATGGAAGCAAAATTGGTTGCACAGTGCAAGATTCCAACCCTAACTCTACCTCATTGGAAACCAAAATACCCTTGTGTGGTTGCACAAACAAGAAAAGCTAATGTGTACAAAGATTCCTTTTTTGATAACATAGCCATAAACCACATCTCAAAATGCCTTCAAGAGGCAACAGGACTCAGAAACAGTAAGAGTGGGTATGAGAGCCTACTAGAGGCAGCTACCATGGCTTCACAGAATTTTAGTTCCATTCAACAGCGTCAACTTGTCACTCAAGCACTTCATAGAGCTTTCCCCAAGCCAATTTTTTTATTGATAAAGAAAGTGTTACCACCGTCTAAATTCACGAGGACATTGTTTGCCATCTTCACCACTTTGTTCTTTGCATGGCTAGTGGGCCCCTCCGAGGTGAGAGAATCGGACATGGACGAGGGGAGAAGAGAAAAAAATGTAGTTCACATAAAAAAGTGCAGATTTTTAGAGGAGGCAAATTGTGTAGGGATGTGTATCAATCTTTGCAAACTACCAACTCAATCATTCATCAAGGATTCTCTGGGTATGTCAGTCAACATGGTCCCTAATTTTGATGACATGAGTTGTGAGATGATATTTGGCCAGGAACCACCAGAATCAACAAATGATCCTGCACTCAAGCAACCCTGTTATAAACTATGCAAGGCGAAAAAGAACCATGGAACAAATTGCCTTGTTAATGCAGCAGGCGAGAAAAGCAGCAGGCGAGAAAAGGGGTTTGAGGTAAGCAAGGAAGGCCCAGATGAGAAAGCATGA 786 0.4211 MEAKLVAQCKIPTLTLPHWKPKYPCVVAQTRKANVYKDSFFDNIAINHISKCLQEATGLRNSKSGYESLLEAATMASQNFSSIQQRQLVTQALHRAFPKPIFLLIKKVLPPSKFTRTLFAIFTTLFFAWLVGPSEVRESDMDEGRREKNVVHIKKCRFLEEANCVGMCINLCKLPTQSFIKDSLGMSVNMVPNFDDMSCEMIFGQEPPESTNDPALKQPCYKLCKAKKNHGTNCLVNAAGEKSSRREKGFEVSKEGPDEKA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1092 261 Pfam Beta-carotene isomerase D27-like, C-terminal 129 210 IPR025114 GO:0005506
Vra8g1092 261 MobiDBLite consensus disorder prediction 238 261 - -
Vra8g1092 261 MobiDBLite consensus disorder prediction 241 261 - -
Vra8g1092 261 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 29 232 - -
Vra8g1092 261 PANTHER BETA-CAROTENE ISOMERASE D27 29 232 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1092 Vra-Chr8 25367382 25374845 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1092 K17911 - gmx:100782912 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0143 3 1630948 1637009 Vra8g1092 8 25367382 25374845 PCT