Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1090 ATGCCTTTTCCGATGAAAATTCAACCAATCGATTCTCAGGTCCCTTCCGAAGGGCCTCGGCTTGAGCTGGCCAAGCCGGTTGTGAAGTCTCGCCTGAAGCGACTCCTTGAGCGTCAATTCTCCGGCGTTCTGAGAAATTCAGCGCCGGAAAAGATCTCCGGTGGCGAAGAACCGCACAACGGCTCCAGTGATTTCGAGCCGAGTTCGGCTTGTTTGGCGAAAATGGTGCAGAATTTCATAGAGGAGAGTCACGAGAAGCACTCCGTGTCACACCGCAACCGCTGTAACTGCTTCAATAGCAACTACGACGATAGCTCTGACGAAGAATCAAACTCGCTGGGCGGTTACGGGGACTCGAATTACTCTTCCAGCGAGGCGTGCGAAACTCTCAAGGGTTTGGTAGCGTGCGCGAGCGCGCACGAGAGGGATTTGCTGGCGGACACTGCAAAAATAGTTGAGAAGAATAAGATCTGCAAGCGCAAGGACACCTTCTGCAGAAAAATTGTCACTGACGGATTGTTAACCCTTGGATACGATGTGGCGATTTGCAAATCTCGCTGGGAGAAATCTCCCTCTTATCCCGCCGGAGAATATGAATACATAGATGTGACGATGGGGAAAGATAGAGTTGTAATTGATATTGACTTTAGGTCAGAATTCGAGATTGCTCGATCCACCAAGTCCTACAAGACTGTTCTGCAGAACCTTCCTTACATATTCGTTGGCACATGCGATCGGTTGCAGAGTATCGTGACCATCGTGTCGGAGGCAGCGAAGCAGAGTCTGAAAAAGAAGGGAATGCATGTGCCGCCGTGGAGAAGAGTTGAATATGTGAAAGCCAAGTGGCTCTCCCCTTACACGCGAACCACTTCCTTCAAAGACGAGAAGAAGGAAGAACAACAGCTTTTGAAAGAAAAATCAGTCACGGCAGAAATAGAAACTTCCGGCGAAGAAAACGCCGCCGTGATCGAATGGAAGCCTCCGGAGCTGAAGCCCAAAGGTTCGCTTTCTGGCGTTAAGATCGTGACAGGTTTGGCTGGGGTTTTTGATGAGGATGATAACCCATAA 1068 0.4981 MPFPMKIQPIDSQVPSEGPRLELAKPVVKSRLKRLLERQFSGVLRNSAPEKISGGEEPHNGSSDFEPSSACLAKMVQNFIEESHEKHSVSHRNRCNCFNSNYDDSSDEESNSLGGYGDSNYSSSEACETLKGLVACASAHERDLLADTAKIVEKNKICKRKDTFCRKIVTDGLLTLGYDVAICKSRWEKSPSYPAGEYEYIDVTMGKDRVVIDIDFRSEFEIARSTKSYKTVLQNLPYIFVGTCDRLQSIVTIVSEAAKQSLKKKGMHVPPWRRVEYVKAKWLSPYTRTTSFKDEKKEEQQLLKEKSVTAEIETSGEENAAVIEWKPPELKPKGSLSGVKIVTGLAGVFDEDDNP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1090 355 PANTHER DUF506 FAMILY PROTEIN 24 355 - -
Vra8g1090 355 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 166 289 IPR006502 -
Vra8g1090 355 MobiDBLite consensus disorder prediction 47 67 - -
Vra8g1090 355 Pfam PDDEXK-like family of unknown function 74 288 IPR006502 -
Vra8g1090 355 PANTHER OS03G0796600 PROTEIN 24 355 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1090 Vra-Chr8 25344409 25346647 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1090 - - gmx:100782749 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0147 3 1667732 1669874 Vra8g1090 8 25344409 25346647 PCT