Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0147 ATGCCTTTCACAATGAAGATTCAGCCAATTGATTCCCCCGGTCATGAGGAGGCAATTCGGCTTGAGCCGGTGAAGCCCATGATGAAGTCGCGGCTGAAGCGACTCTTGGAGCGCCAGTTCTCTGGTGTCCTCCGCAATTCGGCGGCGGAGAAGATCGTTGCTGAGGAGCTGCCACGTTCCGGCAAAGATGGTTTCGCTGATCTCGAACCGAGCTCAGTGTGTCTGGCAAAGATGGTGCAGAGTTTCATGGAGGGGAATCACGAGAAGCATTCCGCTGCCGTGAAATGCGTCCGAAACCGCTACAACAGCTTCGAGGATAGCTCTGACGCGGAAACGCTAGCGTTTGGTAGTTTCAGCGACTCGAGTTATTCCTCCTCTGGTGAAACGCTGGAAATCCTCAAGGGTTTGGTGGCATGTGCGAGTGTTTATGAGAGGAATTTGCTAGCGGACACTACAAAGATCATTGAGAAGAACAAGGCAACGTGCAAACGAAAGGACGATTGTTGCAGAAAGATCATCACTGAAGGGTTGTTGGCTGTCGGATACGATGCTTCTGTATGCAAGTCTCGCTGGGAAAAATCAACGTTCTGCCCTGCCGGTGAATATGAATACATTGATGTGATAATGGGAAAGGAGCGGGTGGTGGTTGACGTTGACTTCAGATCAGAATTCGAGATTGCTCGACCCACCAAGACATACAAAGCGATCCTCCATACTCTACCTTACGTGTTCGTCGGCACGTGCGACCGGTTGCAGAGCATCGTGGCAATCGCTTCGGAGGCGGCGAAACTGAGTCTGAAGAAAAGGTGCATGCATGTTCCGCCGTGGAGAAAAGTGGAATACGTCAGAGCCAAATGGCTCTCCCCCTACACGTGCTCGCGTGGAGTCAAAGAGGAGACCGAAGAGAAAAAGCAACTTGTGGAAGCGTTGTTGGTAACTGCTGCTGCTGAATGCGATACTTCCCGTGAAGATGATGAAAAATCAAAGTCAAAGTTGGTGTCTAAGAAGCCACTGGAGATGAAACCCAAGAGCTCACAGTCCGGTTTGGCAGCTGTGTTCCATGAAAAGCCGTAA 1074 0.5093 MPFTMKIQPIDSPGHEEAIRLEPVKPMMKSRLKRLLERQFSGVLRNSAAEKIVAEELPRSGKDGFADLEPSSVCLAKMVQSFMEGNHEKHSAAVKCVRNRYNSFEDSSDAETLAFGSFSDSSYSSSGETLEILKGLVACASVYERNLLADTTKIIEKNKATCKRKDDCCRKIITEGLLAVGYDASVCKSRWEKSTFCPAGEYEYIDVIMGKERVVVDVDFRSEFEIARPTKTYKAILHTLPYVFVGTCDRLQSIVAIASEAAKLSLKKRCMHVPPWRKVEYVRAKWLSPYTCSRGVKEETEEKKQLVEALLVTAAAECDTSREDDEKSKSKLVSKKPLEMKPKSSQSGLAAVFHEKP* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0147 357 PANTHER OS03G0796600 PROTEIN 26 352 IPR006502 -
Vra3g0147 357 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 26 352 - -
Vra3g0147 357 Coils Coil 297 317 - -
Vra3g0147 357 MobiDBLite consensus disorder prediction 320 338 - -
Vra3g0147 357 MobiDBLite consensus disorder prediction 320 357 - -
Vra3g0147 357 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 170 291 IPR006502 -
Vra3g0147 357 Pfam PDDEXK-like family of unknown function 77 291 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0147 Vra-Chr3 1667732 1669874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0147 - - gmx:100796711 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0147 3 1667732 1669874 Vra8g1090 8 25344409 25346647 PCT