Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1060 ATGCACAGAGAGTATAATGGAAAGCCAACCTTCACACAGATCGTGGTGGCTTCCTCCATCGGGTTGATATTTGCTGCAGCAATGCATTATCGGCTTAAGAAAATGAGAGATCGAAAGACCATTCCACGTCTCAGAATATCAAAGGCAAACCGTAAACCAAAGCTTGAAAAGTTTCCTCATTACGTAGCTAGGCAAATGGGGTTCAAAGATAGAAGATGTTGTCCTCATCTTTGTAAATTGGCTTCTGAATACATAAGGAAATCCGAGGGATGTGAAAATGATCTCTATAGCTTCTTTGAGAATGAACCAGATGCCGATTCGCTTTTTGTGAAGCTTGTGGAAGAGTTTGAGAGATGTATTCTCAGTTACTTTGCATTCCATTGGAGACATGGTGATATTTTGATAAGTCAGGTATCTACATTTGTGAAAATCTCTTTTCTTTGTTGTCTGGAATTGCAGGTGTTTAGCTCTGAAATTGAACCAAGGGCAAAGCTCAGGCACATAGTTATGGCAGCAACTAGGGAACAAAGGATCGACAGAGTGACCAAGAATCTGAAGGTAGCTAGAGTTTTCAACACATTAGTGGAAGAAATGAAAGCAATGGGACTGACAAATGATGACTCCCAATGCACAGAGGTGATGGCTCCAGTGGCTCACAGTGATAGGAGCCCAGTGCTTCTTTTCATGGGTGGTGGCATGGGAGCTGGCAAAAGCACTGTACTCAAGGACATTCTTAAAGAACCTTTCTGGGCAGGAGCAGCAGGCAATGCTGTCATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAGGGCCCTCAGTGCAAGAGGGCATCAGGACATGATTAGAACAGCTGAACTGGTACACCAATCATCAACTGACGCAGCCTCATCCCTCCTAGTGACAGCACTAAATGAGGGGCGAGATGTAATAATGGACGGTACACTCTCCTGGTTACCATTTGTTGTGCAAACAATAACAATGGCTAGAAATGTCCACCGCCGCCGCTACCGCATGGGACCTGGCTACAAGATGAATGGCGATGGAACTGTCACTGAAAACTATTGGCAGCGAATTGAGGAAGAGCAAGACCGGGTTGAAGGAAAGAGGAGAAAACCATACAGAATAGAGCTTGTTGGAGTAGTATGTGATGCTTACCTTGCTGTCATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTGAAGTCACAACTCACATCGCACAAGAGATTTGCTGATGCATTTCTCACTTATTGTCAGCTAGTTGACAATGCTAGGCTATACAGTACAAATTCTTTGGAAGCTCCACCTAAGTTGATAGGATGGAAAGATAGAGACAAGACATTGCTGGTTGATCCAGATGAAATAGACTGTTTGAAGAGGGTGGCAACGTTGAACGAAAGTGCCAACAACATATATGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGTTGGATCCATATGGAAAGACATTGTGCTATCTCCTTCAAGGTTGAACGTCCAAAAAGAGCTGAAGTATTCAATCCAAAAGATTGAGAATTTAAAACTATAG 1572 0.4326 MHREYNGKPTFTQIVVASSIGLIFAAAMHYRLKKMRDRKTIPRLRISKANRKPKLEKFPHYVARQMGFKDRRCCPHLCKLASEYIRKSEGCENDLYSFFENEPDADSLFVKLVEEFERCILSYFAFHWRHGDILISQVSTFVKISFLCCLELQVFSSEIEPRAKLRHIVMAATREQRIDRVTKNLKVARVFNTLVEEMKAMGLTNDDSQCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYRALSARGHQDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWLPFVVQTITMARNVHRRRYRMGPGYKMNGDGTVTENYWQRIEEEQDRVEGKRRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLTSHKRFADAFLTYCQLVDNARLYSTNSLEAPPKLIGWKDRDKTLLVDPDEIDCLKRVATLNESANNIYELYKHPNPACEVGSIWKDIVLSPSRLNVQKELKYSIQKIENLKL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1060 523 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 522 - -
Vra8g1060 523 Pfam Zeta toxin 218 330 IPR010488 GO:0005524|GO:0016301
Vra8g1060 523 PANTHER UNCHARACTERIZED 3 522 IPR044802 -
Vra8g1060 523 Gene3D - 207 445 IPR027417 -
Vra8g1060 523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 362 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1060 Vra-Chr8 24713614 24716961 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1060 - - pvu:PHAVU_007G178200g 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1060 8 24713614 24716961 Vra8g1060 8 24713614 24716961 ECH
Vra3g0162 3 1839939 1843484 Vra8g1060 8 24713614 24716961 PCT