Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0162 ATGGTTTTCTCCCCTCACTCACCTCAAACTTGTCCAGATTACGATGTCAAACCCAGTTTTACACAGATCACCGTAGCCATTTCTGTGGGGTTGTTGTTTATCGTGGTCTTTCATTTTCGTCTGAAACAATCTAGAGATCGAAAGATCATCCCACGTATAAGATTATCACGAGCAAGCCACGTCCCAAAGCTTGAAAGATTCTCCCATTACGTAGCTAGGCAAATGGGGTTCAAAGACAGAAGATTTTGTCCCCATCTATGTAGATTAGCTTCTGAATACATAAGGAAATACGAGGGACTTGAAGATGATATATACGCCTTTTTTGAGAATGAACCCGATGCCGATTCACTTTATGTGAAGCTGGTAGAGGAGTTTGAGAGATGCATTCTTAGTTACTTAGCATTTCATTGGAACTACGGTGACATAATTATGAGTCAGGTGTTGAGCTCGGAAAATGAGCCTAAAAAGAGGCTCAAGAACATAGTCATGGCAGCAACTAGGGAACAAAGGTTCGAGAGACTTGCCAAGAATCTGAAGGTGGCTAGAGTTTTTAATACCTTAGTGGAAGAAATGAAAGCAATGGGAATTGCTACAACCGATGATTCTCAATGTACCGAGGTGATGGCTCCAGTAGCTCATAGCGATAGGAGTCCAGTGCTCCTTTTAATGGGTGGAGGCATGGGAGCTGGCAAGAGCACCGTGCTCAAGGATATTCTCAAAGAACCTTTTTGGGCAGGAGCATCCGGGAATGCCGTAGTCATTGAGGCAGATGCGTTCAAAGAATCAGATATGATCTACAAGGCCCTCAGCTCAAGAGGTCACCAAGACATGATTCAAACAGCAGAACTGGTACACCAATCATCCACAGATGCAGCCTCATCACTCTTAGTTACAGCACTGAATGAAGGACGAGATGTTATCATGGATGGCACACTGTCCTGGGTGCCGTTTGTTGTGCAGACAATTACAATGGCTAGGAATGTTCATCGTCGACGTTACCGCATGGGAGCTGGCTATAGGGTGAAGGATGATGGAACTGTAATTGAAAACTATTGGGAGAGAATTCAAGGCCAAGAGCCTGAACAAGTTGAAGGCAAAAAGCGAAAACCATATAGGATAGAGCTTGTTGGTGTAGTATGTGATGCTTATCTTGCAGTCGTTAGAGGCATAAGGAGAGCTATCATATGCAGAAGAGCAGTGAGAGTAAACTCACAGTTGAAATCACACAAGAGATTTGCTCAGGCATTTATGACTTACTGTCAACTAGTAGATAATGCACGACTATACTTCACAAATGCATTGGAAGGTCCACCCAAGTTGATAGGATGGAAAGATAGGGACAAGACACTGCTGGTTGATCCAGATGAATTCGACTGTTTGAAGAGGCTTGCCAGGTTGAACGAAAATGCAAACTCCATTTATGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCCGGATCAGTATGGAAAGACATCGTATTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAGTACTCAATCCAAAGAATTGAAAGCGTCAAATATAACTTCACCCTTGAGTCTAGTAACAGATGA 1584 0.4337 MVFSPHSPQTCPDYDVKPSFTQITVAISVGLLFIVVFHFRLKQSRDRKIIPRIRLSRASHVPKLERFSHYVARQMGFKDRRFCPHLCRLASEYIRKYEGLEDDIYAFFENEPDADSLYVKLVEEFERCILSYLAFHWNYGDIIMSQVLSSENEPKKRLKNIVMAATREQRFERLAKNLKVARVFNTLVEEMKAMGIATTDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGASGNAVVIEADAFKESDMIYKALSSRGHQDMIQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGAGYRVKDDGTVIENYWERIQGQEPEQVEGKKRKPYRIELVGVVCDAYLAVVRGIRRAIICRRAVRVNSQLKSHKRFAQAFMTYCQLVDNARLYFTNALEGPPKLIGWKDRDKTLLVDPDEFDCLKRLARLNENANSIYELYKHPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQRIESVKYNFTLESSNR* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0162 527 Pfam Zeta toxin 212 324 IPR010488 GO:0005524|GO:0016301
Vra3g0162 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 345 IPR027417 -
Vra3g0162 527 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 13 520 - -
Vra3g0162 527 Gene3D - 198 436 IPR027417 -
Vra3g0162 527 PANTHER UNCHARACTERIZED 13 520 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0162 Vra-Chr3 1839939 1843484 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0162 - - gmx:100794775 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0162 3 1839939 1843484 Vra8g1060 8 24713614 24716961 PCT