Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0979 ATGGCTCCACCTATTGAGACCCCAATCAAGGTTTCCGGCTATCAGCACACCCCACACCCTCCTCTTAACGAGAGGATTCTTTCATCCTTGACCCGGAGGACTGTTGCTGCACACCCATGGCATGATCTTGAGATAGGACCTGAAGCTCCAAAGATCTTCAACTGTGTGGTCGAAATTGGAAAAGGAAGCAAGGTGAAATATGAACTTGACAAAAAAACTGGACTTATCAAGGTTGATCGTATACTTTACTCGTCAGTTGTCTATCCTCACAACTATGGGTTTATACCTCGTACTATTTGTGAGGACAGTGACCCCATGGATGTCCTGGTTATTATGCAGGAGCCGGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCTATTGGACTCATGCCTATGATCGACCAGGGTGAGAAAGATGACAAGATAATTGCTGTATGTGCTGATGATCCCGAGTATCGTCATTACAATGATATCAAGGACCTTCCTCCCCATCGTTTAGCTGAAATCCGTCGCTTTTTTGAAGATTACAAGAAGAATGAAAACAAGGAAGTTGCAGTAAACGACTTTCTTCCTGCCTCATCTGCCTATGAAGCGATCAAGCATTCCATGACTTTGTACGCAGACTACGTTGTGGAGAGCTTGAGGCGGTAG 651 0.4547 MAPPIETPIKVSGYQHTPHPPLNERILSSLTRRTVAAHPWHDLEIGPEAPKIFNCVVEIGKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTICEDSDPMDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKDLPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASSAYEAIKHSMTLYADYVVESLRR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0979 216 SUPERFAMILY Inorganic pyrophosphatase 32 210 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra8g0979 216 CDD pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra8g0979 216 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
Vra8g0979 216 Pfam Inorganic pyrophosphatase 55 206 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra8g0979 216 PANTHER INORGANIC PYROPHOSPHATASE 22 214 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra8g0979 216 Gene3D Inorganic pyrophosphatase 34 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra8g0979 216 PANTHER BNAC07G03580D PROTEIN 22 214 - -
Vra8g0979 216 Hamap Inorganic pyrophosphatase [ppa]. 51 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0979 Vra-Chr8 22071165 22074979 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0979 K01507 - gmx:100306101 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0348 3 4139650 4144430 Vra8g0979 8 22071165 22074979 PCT