Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0348 ATGGTTGAAACAGACATGGATACCGAAACTGCTGCAAACGTGGTTCCGTCAAAGGAGACTCCAAACAATGATCCCATTTCTCATCATTCCTCACATCCTCCTCTTAATGAAAGGATTATTTCATCCATGACCAGGAGATCTGTTGCTGCTCACCCGTGGCATGACCTTGAGATAGGGCCTGGCGCTCCAACGATCTTCAATTGTGTGATTGAGATAGGGAAAGGAAGCAAGGTGAAATACGAGCTGGATAAAACATCGGGACTTATCAAGATCGATCGCGTGCTTTACTCATCGGTTGTGTATCCTCACAACTATGGTTTTATCCCACGTACTATTTGTGAGGACAGTGATCCCCTGGATGTCTTGATCATCATGCAGGAGCCAGTTCTTCCCGGCTGCTTTCTTCGGGCCAAAGCAATCGGTCTCATGCCCATGATTGATCAGGGGGAGAAAGATGATAAAATAATCGCTGTCTGTGCTGATGATCCTGAGTATCGTCATTACAATGATATCAAGGAGCTGCCTCCGCATCGTTTAGCTGAAATTCGTCGCTTTTTTGAAGACTACAAGAAGAATGAAAACAAGGAAGTTGCTGTAAACGACTTTTTGCCTGCCTCAGCTGCTTTTGAAGCTATTAAGAGATCCATGAGCTTGTATGCGGACTACATAGTGGAAGGCTTGAGGCGTTAG 690 0.4536 MVETDMDTETAANVVPSKETPNNDPISHHSSHPPLNERIISSMTRRSVAAHPWHDLEIGPGAPTIFNCVIEIGKGSKVKYELDKTSGLIKIDRVLYSSVVYPHNYGFIPRTICEDSDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAFEAIKRSMSLYADYIVEGLRR* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0348 229 PANTHER BNAC07G03580D PROTEIN 35 229 - -
Vra3g0348 229 MobiDBLite consensus disorder prediction 1 35 - -
Vra3g0348 229 Pfam Inorganic pyrophosphatase 68 219 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra3g0348 229 Gene3D Inorganic pyrophosphatase 47 225 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra3g0348 229 Hamap Inorganic pyrophosphatase [ppa]. 64 220 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra3g0348 229 CDD pyrophosphatase 65 217 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra3g0348 229 ProSitePatterns Inorganic pyrophosphatase signature. 115 121 - -
Vra3g0348 229 SUPERFAMILY Inorganic pyrophosphatase 44 223 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra3g0348 229 PANTHER INORGANIC PYROPHOSPHATASE 35 229 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra3g0348 229 MobiDBLite consensus disorder prediction 10 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0348 Vra-Chr3 4139650 4144430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0348 K01507 - gmx:100784203 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0348 3 4139650 4144430 Vra8g0979 8 22071165 22074979 PCT