Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0960 ATGAATGTGGTAGGAAAAGTTGGCAGCTTGATATCTCAAGGTGTGTACTCAGTTGCAACCCCTTTTCACCCCTTTGGCGGAGCTATTGATGTGATTGTTGTTCAGCAACAAGATGGGACATTTCGGAGTACGCCTTGGTATGTTCGGTTTGGTAAATTTCAGGGTGTTCTCAAAGGTGAGGAAAAGTATGTTAAGATAAATGTTAATGGTGTTGAGGCCAATTTTCATATGTGTCTTGACAACTCAGGGGAGGCTTATTTCTTGAAGGAGGTGGATTATGATAAAGTGATTGATTCAATTGAGGTTGTTCAAGATTCCATTGACCAAAAGAATGGCTATTTAGGTAATGTTCATAGACTTGATCATAGCATATCGGATTCTGGGGTTCTGAAGTTGAAAGAGCAGTGTGATTCCTCAGTTGTGCATGCGCCTCAAATTCAAAGGTCAGAATCTGATGTTGATAGGAGATTTTACGAATTTCCAGATGATCGATCTTCTTTAGAAGATTCAGTTGAGTTGTCAGAATACGACTCTAATTCATTCGGGAGCCTAGAGGGAGACAATTTTGCAGAGTCACAGGGTGCACATCCAGAGATGGTCTTGGTGAGTGTTGATGGTCATATATTAATGGCCCCTATCTCAGAAACCGAGCAAACTGAGGAGAATGTGCACTTAAAAACTCCTCAATTTCACCTGGGACCAGGTGAAGAGACTGACTTATGTGAAGGCAATGGAAAGATTGGTGAAAATGCTTGGGCTACTGATTATATTAGTCAGCTAGATGCTCAAACAACTAATGTCCATCCTAGATGTTGTAACATTAATGGTGACGATAATACTTTTAAGCTCTTACACGAAGTTTGTCAAAGAGAGGAGGCACATATTAGTCAGACGCAGGAAAACTTAGAGATTAAAAATCCGGAGGTGAAAACTGATTCAGAAGTGGCTGCATCTGGTATCAATAGGGAGAATGTTTTCAAAAGCTGTTTGGAGCTGCAACATTTTGGTCAGCAGGCTGGAAATGCTGCTGATTTACAAGATACAGATTCTCCATTGGGGATTCAAAATTCAGCAGATCAATCTAATGGAAGTTGTTTTGTAGTTAATGAAGATGAACAAGGGAGGATTGTGCAACCTAAAAGCGGCGATGATTTATCACCTCCTGGTTGTTCTATTTCTTCTAATGGCTATGGATATCCAAAATCAGAATGGGTAATTGGAGAGGTTGAGAAAAATGCATCTGGAGAAATTGAAATTGATCCTGGCTATCGTTCAGTTACTACTGAAACAGAACAGAATAATGAACATGCTGTCAAGTCAGTGTCAAATAATGCGGGAGATGAGAGTCAACAAGCCCCTTCACTCAAAGATGTCAGGGCTACATCTGAGGTAGTGGAACCTCAAACAGAAACTTCAAATAAAGGGGATCAAAGCCACTTGGGTTTGGGATTTGAGATTTCACTTTGTGGTCATGAACTTAAGCCGGGGATGGGTTCAGTAGCTGCTGCTGAAGTGTTTGAAGCACATCGCATATCTTCAGTTGACTTCACAAGTTCTGCTCCTTCAATAATTAAAAATCCAAATCTTGTTATCAAGTTTAAAGAGAGGTACATGACGTGGGAAAAGGCTTCTCCTCTTGTTCTTGGAATGGCTGTTTATGGTTTAGATTTGCCTGTTGAGCCCAAAGATACGGTTCCTGTGGAACAGGATCAAGCATTGAAGTCTAGGGATAATGATCTAGGATCATCTTCGGCTGGGCGCAGATGGAGACTGTGGTCTATTCCTTTCCGAAAGGTCAAAACATTTGACCATACTAATAGCAATACATCAAATGAGGAGGTGTTTCTTGATTCTGAGTCTGGATCTTTTGCAGACCAAACTCCAACATCCAGTACCCAGGGATCTCCTGGAAAGCAATTTCTAAGAACAAATGTTCCCACTAATGAGCAGATAGCATCCTTAAACCTCAAAGATGGTCAAAATTTGGTAACATTCAGTTTCTCTACAAGGGTTCTCGGTACACAACAGGTTGATGCTCACATCTATTTATGGAAGTGGAATGCAAGAATTGTTATTTCAGACGTTGATGGAACTATTACCAAGTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGACGCAATCTGGAGTGGCCAGGCTTTTCTGTGCCATTAAGGAAAATGGATACCAGCTACTTTTTCTGAGTGCCCGGGCCATTGTCCAGGCATATCTAACTAGAAATTTCTTGTTCAACCTGAAACAGGATGGAAAAACCTTACCAAATGGACCTGTTGTTATCTCACCTGACGGATTATTTCCCTCACTTTACCGAGAAGTGATACGAAGAGCACCACATGAATTCAAGATTGCTTGTTTAGAGGATATCAAAAAGCTTTTCCCTTCTGACTATAACCCATTCTACGCCGGATTTGGAAATAGAGATACAGATGAGCTCAGTTACAGAAAGATTGGCATCCCGAAGGGCAAAATATTTATCATTAACCCCAAGGGTGAGGTAGCTATTAGTCACCGAATTGGTGCAAAGTCATATACATCATTACACACCCTTGTGAATGACATGTTTCCACCAACTTCTTTGGTCGAGCAGGAGGACTACAACTCATGGAACTATTGGAAAACCCCATTGCCAGATTTAGATTAG 2673 0.4104 MNVVGKVGSLISQGVYSVATPFHPFGGAIDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGEEKYVKINVNGVEANFHMCLDNSGEAYFLKEVDYDKVIDSIEVVQDSIDQKNGYLGNVHRLDHSISDSGVLKLKEQCDSSVVHAPQIQRSESDVDRRFYEFPDDRSSLEDSVELSEYDSNSFGSLEGDNFAESQGAHPEMVLVSVDGHILMAPISETEQTEENVHLKTPQFHLGPGEETDLCEGNGKIGENAWATDYISQLDAQTTNVHPRCCNINGDDNTFKLLHEVCQREEAHISQTQENLEIKNPEVKTDSEVAASGINRENVFKSCLELQHFGQQAGNAADLQDTDSPLGIQNSADQSNGSCFVVNEDEQGRIVQPKSGDDLSPPGCSISSNGYGYPKSEWVIGEVEKNASGEIEIDPGYRSVTTETEQNNEHAVKSVSNNAGDESQQAPSLKDVRATSEVVEPQTETSNKGDQSHLGLGFEISLCGHELKPGMGSVAAAEVFEAHRISSVDFTSSAPSIIKNPNLVIKFKERYMTWEKASPLVLGMAVYGLDLPVEPKDTVPVEQDQALKSRDNDLGSSSAGRRWRLWSIPFRKVKTFDHTNSNTSNEEVFLDSESGSFADQTPTSSTQGSPGKQFLRTNVPTNEQIASLNLKDGQNLVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFCAIKENGYQLLFLSARAIVQAYLTRNFLFNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIGAKSYTSLHTLVNDMFPPTSLVEQEDYNSWNYWKTPLPDLD* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0960 890 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Vra8g0960 890 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 484 590 IPR031703 -
Vra8g0960 890 PANTHER LIPIN 1 890 IPR026058 -
Vra8g0960 890 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 890 - -
Vra8g0960 890 SUPERFAMILY HAD-like 682 832 IPR036412 -
Vra8g0960 890 MobiDBLite consensus disorder prediction 464 478 - -
Vra8g0960 890 SMART lns2 690 846 IPR031315 -
Vra8g0960 890 Pfam LNS2 (Lipin/Ned1/Smp2) 644 866 IPR013209 -
Vra8g0960 890 MobiDBLite consensus disorder prediction 429 478 - -
Vra8g0960 890 MobiDBLite consensus disorder prediction 429 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0960 Vra-Chr8 21478572 21487722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0960 K15728 - gmx:100795884 1498.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0362 3 4338120 4346098 Vra8g0960 8 21478572 21487722 PCT