Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0362 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTCTATTCAGTTGCGACCCCTTTTCATCCATTTGGTGGGGCGGTTGATGTCATTGTTGTTCAGCAGCAAGATGGCACGTTCCGCTGCACGCCGTGGTATGTTCGCTTTGGTAAGTTTCAAGGTGTGCTCAAAGGTGCCGAAAAGGTTGTTCGGATAAACGTCAATGGGGTTGAATCACACTTCCACATGTATCTTGACAATTCGGGGGAGGCTTATTTTGTAAAAGAGGTGGATGATGATGGTGGTGATAATGGAATAAAGTCAAATGGGACTGCTGGTAACTCTGAGTGTAGTCAAGAAGACGATGGTGTCGAAATTGATGAAAAAAATAATAGTTATCTGAGCATTGATGGTAGAGTTGGTCACAGATTTGACCATAGCATATCTGATTCAGGGGTGCGGTATCTTACTGGTGAAGGCCATTCCTCAGTTTTGTCACAACTCCAAAGGGCAGAATCTGATGTCGATAGGAGATTTTATGAGTTCCCAGATGATCAACCCTCTTTTGAAGGTTCACTTGATGTTTCGGAATATGATTCTACTAGATATGAGAATCTAGACGTGGATAATTTTATGGACTCACAGGGCTCCCATCCGGAGGTGGTTTTGGTTAGTGTTGATGGTCATGTATTGACGGCCCCTATCTCAGAATCGGAGCAGAATGAGGACAATGTTCAGTTAAAAAATCCTCAATTTCATCTAGGCCCAGGTGAAGGGACTGACTTTTATGAGGGCAATGGGGAACTTATTTCTGATGAAAATGCTTGGACTGCTGATTATGTTAGTCCGCTGGATGCTTCTAGTAGTTATGACACTAAGGTAGCTGATGATACTTCCGGGCTCTTGTTGGAAGCTCAAGGACAGGGGGAAATTAATTGTCACACTGAGGAAAGCTTAGTGATTAAAAATCAAGAAAATCATCTTTTGCAAACTGATTCAGAAGAGGCTGTATCTTGTATGAAGAGAGAGAGTGTCTTCAAAAGTTGTTTGGAATTACGTGAATTTACTCAGCAGGCTGGAAACGATGATTTACAAGATCTAGATTCTTCATTGGGGGTTCAAAATTCAGCAGAGGAATCCAATGCAAATATTTCAATTACTGATGAGAATAAAGACGAAAACATTCAGGTTGATATACAAGATGTAGATTCTTCACTGGAGGTTCGAAATATATCAGAGAAATTAATTGCAAATGGTTCAATTACTGATGAAAATAAACAAGAAAACATCGATCAATGTAGAAAAAGTGACAGGTTATCTCCGCTTAGTGTGCCTTCTTCCTTTGATGACCATAGTTCTCCAGAATTAGAAGTAGAACCTCAAGTGGTTGATAGAGACGCATCAGTGAAAGTTGACACTGGTTCTGGCAGTCATTACGGTGCTAAAGATGTTATTGAATGTAATGATGAACGTGTTGGAGAGTCAGTATCAAATGATCATGTAGATGATAGTGAACAAACTCCTGCACTTGAAGATGGCAATAAGAAAAGTGAACTTACTGAACCTCAAATTGTAACTTCCATTGACGAGGACCAATGTCATTCTGCTTTGAGATTTGAGGCCTCACTTTGTGGTCACGAACTTAAGGTGGGTATGGGTTTGGTTGCTGCTGCTGAGGTTTTTGAAGCACATCGGATATCTGCGGAGGAATTTAGAAGTTCAGCATCATCCATAATTAAGAATGAAAATCTGGTTTTGAAGTTCCGAGAGAGCTATCTGCGGTGGGAAAAGGCTGCCCCTCTTGTCCTTGGAAAGACTATATTTGGTTTAGACTTACCTGTTGATCCCAAAGATACAATTCCAGTGAGACAGGACGATACAGTAAAGGCTACAGATGAAGTTTCTGGACCAGCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTAGAAGAGTCAAGACAATTGAGCACACTGATAGTGAATCAAATGAGGATGTATTTGTAGATTCCGAGTCTGATTGGCAAACTTCTACCGTTGAACCTTCTCCAACATCTGCTAGAAATGAGTCTCCTCGCAAGCAATTCGTGAGGACAAATGTTCCATCGAATGAGATGATAGCATCCTTAAATCTCAAGGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAAAACAGCAGGTTGATGCTCATATTTACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGACGTTTTGGGGCAGGTCATGCCTTTGGTTGGCAGAGATTGGACACAGTCTGGAGTGGCAAGGCTTTTCTCAGCTATTAAAGAAAACGGATACCAGTTACTGTTTTTGAGTGCCCGTGCTATTGTCCAAGCTTATCTTACCAGGAACTTTTTGGTTAACCTGAAACAGGATGGCAAGAACTTACCCAATGGACCTGTTGTCATTTCTCCTGACGGATTATTTCCCTCTCTTTACCGAGAAGTAATAAGAAGGGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAACCCATTCTATGCTGGGTTTGGCAATAGAGACACTGATGAACTTAGTTACAGAAAGATGGGAATCCCGAAGGGCAAGATATTTATTATCAATCCCAAGGGTGAAGTCGCAACAAGTCACCGTATTGATTCAAAATCCTACACATCATTACACACACTCGTCAATGACATGTTCCCTCCCACTTCTCTGGTTGAGCAGGAGGATTTCAACTCATGGAATTATTGGAGAATGCCTTTTCCAGAAGTGGATTAG 2826 0.413 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRCTPWYVRFGKFQGVLKGAEKVVRINVNGVESHFHMYLDNSGEAYFVKEVDDDGGDNGIKSNGTAGNSECSQEDDGVEIDEKNNSYLSIDGRVGHRFDHSISDSGVRYLTGEGHSSVLSQLQRAESDVDRRFYEFPDDQPSFEGSLDVSEYDSTRYENLDVDNFMDSQGSHPEVVLVSVDGHVLTAPISESEQNEDNVQLKNPQFHLGPGEGTDFYEGNGELISDENAWTADYVSPLDASSSYDTKVADDTSGLLLEAQGQGEINCHTEESLVIKNQENHLLQTDSEEAVSCMKRESVFKSCLELREFTQQAGNDDLQDLDSSLGVQNSAEESNANISITDENKDENIQVDIQDVDSSLEVRNISEKLIANGSITDENKQENIDQCRKSDRLSPLSVPSSFDDHSSPELEVEPQVVDRDASVKVDTGSGSHYGAKDVIECNDERVGESVSNDHVDDSEQTPALEDGNKKSELTEPQIVTSIDEDQCHSALRFEASLCGHELKVGMGLVAAAEVFEAHRISAEEFRSSASSIIKNENLVLKFRESYLRWEKAAPLVLGKTIFGLDLPVDPKDTIPVRQDDTVKATDEVSGPASSGRRWRLWPIPFRRVKTIEHTDSESNEDVFVDSESDWQTSTVEPSPTSARNESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGKQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGRDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLVNLKQDGKNLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKMGIPKGKIFIINPKGEVATSHRIDSKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWRMPFPEVD* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0362 941 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 391 941 - -
Vra3g0362 941 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 390 - -
Vra3g0362 941 SMART lns2 741 897 IPR031315 -
Vra3g0362 941 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Vra3g0362 941 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 534 639 IPR031703 -
Vra3g0362 941 Pfam LNS2 (Lipin/Ned1/Smp2) 696 917 IPR013209 -
Vra3g0362 941 MobiDBLite consensus disorder prediction 416 456 - -
Vra3g0362 941 SUPERFAMILY HAD-like 733 883 IPR036412 -
Vra3g0362 941 MobiDBLite consensus disorder prediction 656 689 - -
Vra3g0362 941 PANTHER LIPIN 1 390 IPR026058 -
Vra3g0362 941 PANTHER LIPIN 391 941 IPR026058 -
Vra3g0362 941 MobiDBLite consensus disorder prediction 488 512 - -
Vra3g0362 941 MobiDBLite consensus disorder prediction 665 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0362 Vra-Chr3 4338120 4346098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0362 K15728 - gmx:100780784 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0362 3 4338120 4346098 Vra8g0960 8 21478572 21487722 PCT