Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0949 ATGGAGTCTCTCCCTGGAATTCACCACTATCACCTTGCACTCTCTCACTCCCCACCACAACGGAGTCTGAAGTTATGGCATGCTTTTTCGTTTCCAACACCCATCAGAGCTTCATCTTCACCCGCACCCAAACAAAACGTATTTTACAAACCCCAAACCCCCTTAACCCAACTTCTCAAAACCCTAAACCCTCTTCTCTCCCCTCTCGTCAAACCCACCTGCATCGCCATAGCCGCCACCGCATTCTCCTTCATGCGTCTCCACCCTCCTCCCGTTGCATCGGCGCTTACACGTGCCCCTCCGCCACCCTCCTCGGCCTCAGAAATTCCTTCCGATTATACTGCCCCATCAGAAATTCTTCCCGACGACACTACCGCTTCGGATATTCTCCCCGACTACACTGCCACGTCGGATATTGATTCCGACGACACTGCCACGTCGGATATTGATTCCGACGACACTGCCACATCGGATATTCATTCCGACAACACTGCCACGTCGGATATTCTTCCCGACGACACTGCCACGTCGGATATTCTTCCCGACGACACGGCCGCGTCGGAAGACGAGATTGCCCCGTCAGAAACTCTCTCCGAAGAGAGCGTGGCCCAAGAGCAATCGAGCAATGACGTCGTTGAGCTTGAGTCCCTCCTACGGACAAAAATGAGAGCCAGCGAAATCGACGAAGCGCTCCTCGTCCTGGACCGTCTAATTGAACTGGAACCGGAAGAGCTGGAGTATCCGTTCGTCAAGGCGCACCTGCAACTGCTCAACGGCGAGCACGAACTCGCATCGATGGGGTTTGAGGAATTGCTTCAGAGGGATCCATTCCACTTGGAGACGTATCGATGCCTGTTAATGCTAATTTCGGAGACGAAGGCGCCGACCGTGGAGCTTCTGAAGAAAATCGAAGAGGCCGTGAAGGTTTGCGCGGAACAAGAGAGGGATTCCGATCTGAGAGACTTTAAGTTGTTGATTGCGCAGATAAAGGTTATCGATGGGGATTTATATGATGCGTTGAAGGTGTATGAGGAGCTTGCGAAGGAAGAACCCAAGGATTTTAGACCTTACTTGGGTCAGGGTATTGTGTATACTATGCTGAAAAAGAATGATGAAGCTGAGAAGCAGTTTGAGATGTTTGGCACGCTTGCTCCCGAGAATCATCCATATAAGCAGTATTTTGAGGACAATTCTAGGATTTTGGAGACGGGACTACAAGACGCAAAGAGCTGA 1233 0.5126 MESLPGIHHYHLALSHSPPQRSLKLWHAFSFPTPIRASSSPAPKQNVFYKPQTPLTQLLKTLNPLLSPLVKPTCIAIAATAFSFMRLHPPPVASALTRAPPPPSSASEIPSDYTAPSEILPDDTTASDILPDYTATSDIDSDDTATSDIDSDDTATSDIHSDNTATSDILPDDTATSDILPDDTAASEDEIAPSETLSEESVAQEQSSNDVVELESLLRTKMRASEIDEALLVLDRLIELEPEELEYPFVKAHLQLLNGEHELASMGFEELLQRDPFHLETYRCLLMLISETKAPTVELLKKIEEAVKVCAEQERDSDLRDFKLLIAQIKVIDGDLYDALKVYEELAKEEPKDFRPYLGQGIVYTMLKKNDEAEKQFEMFGTLAPENHPYKQYFEDNSRILETGLQDAKS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0949 410 SUPERFAMILY TPR-like 222 388 IPR011990 GO:0005515
Vra8g0949 410 Gene3D Tetratricopeptide repeat domain 199 409 IPR011990 GO:0005515
Vra8g0949 410 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 124 - -
Vra8g0949 410 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 161 405 - -
Vra8g0949 410 MobiDBLite consensus disorder prediction 95 209 - -
Vra8g0949 410 MobiDBLite consensus disorder prediction 158 173 - -
Vra8g0949 410 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 161 405 - -
Vra8g0949 410 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0949 Vra-Chr8 21062174 21079135 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0949 - - vra:106770360 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0355 3 4265793 4270208 Vra8g0949 8 21062174 21079135 PCT