Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0942 ATGGCTTCCGATTCCAATTCAAATCTTAGAATCACCATTGAAAGAAATCCTCCCGAGTCACGTCTAGCTGAATTGAATATCAAGTGTTGGCCCAAATGGGGTTGCTCTCCAGGGAAGTACCAATTAAAGTTTGATGCTGAAGAGACGTGCTATCTGTTGAAAGGGAAGGTGAAGGCATACCCAAAAGGGTCATCGGAATTTGTGGAGTTTGGTGTTGGAGACCTTGTGACCATCCCAAAGGGACTCCATTGCACTTGGGATGTTTCAGTTGCTGTGGATAAGCACTATAAATTTGAATCAACACCGTCATCTTCTTCTTAG 321 0.4361 MASDSNSNLRITIERNPPESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGVGDLVTIPKGLHCTWDVSVAVDKHYKFESTPSSSS* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0942 106 Gene3D Jelly Rolls 2 98 IPR014710 -
Vra8g0942 106 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Vra8g0942 106 PANTHER RMLC-LIKE CUPINS SUPERFAMILY PROTEIN 6 104 - -
Vra8g0942 106 SUPERFAMILY RmlC-like cupins 21 96 IPR011051 -
Vra8g0942 106 CDD cupin_TM1112-like 30 98 - -
Vra8g0942 106 PANTHER OS04G0445200 PROTEIN 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0942 Vra-Chr8 20834060 20835222 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0942 - - gmx:100793722 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0942 8 20834060 20835222 Vra8g0942 8 20834060 20835222 ECH
Vra3g0319 3 3755022 3755826 Vra8g0942 8 20834060 20835222 PCT