Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra3g0319 | ATGAAACAACCATCCATGGCTGCAGATTCCAACTCAAACCTCAGAATCACCATTGAAAGAAATCCTCCACAGTCACGCCTAGCTGAGTTGAACATCAAGTGCTGGCCCAAGTGGGGTTGTTCTCCAGGGAAGTACCAGTTGAAATTTGATGCAGAAGAGACATGCTACTTGGTGAAAGGGAAGGTGAAGGCTTACCTAAAAGGGTCATCAGAGTTTGTGGAGTTTGGAGCTGGAGACCTTGTCACCATTCCAAAGGGACTCAGTTGCACTTGGGATGTGTCTCTTGCAGTGGATAAGTATTACAAATTTGAATCAAATTCTTCTGCTACATCATCATCATCTTGTTAA | 348 | 0.4397 | MKQPSMAADSNSNLRITIERNPPQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYLKGSSEFVEFGAGDLVTIPKGLSCTWDVSLAVDKYYKFESNSSATSSSSC* | 116 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra3g0319 | 115 | SUPERFAMILY | RmlC-like cupins | 22 | 94 | IPR011051 | - | |
| Vra3g0319 | 115 | Gene3D | Jelly Rolls | 5 | 103 | IPR014710 | - | |
| Vra3g0319 | 115 | CDD | cupin_TM1112-like | 35 | 103 | - | - | |
| Vra3g0319 | 115 | PANTHER | OS04G0445200 PROTEIN | 7 | 110 | - | - | |
| Vra3g0319 | 115 | Pfam | EutQ-like cupin domain | 28 | 101 | IPR008579 | - | |
| Vra3g0319 | 115 | PANTHER | RMLC-LIKE JELLY ROLL PROTEIN-RELATED | 7 | 110 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra3g0319 | Vra-Chr3 | 3755022 | 3755826 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra3g0319 | - | - | pvu:PHAVU_001G167300g | 207.608 |
Event-related genes