Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0926 ATGTCCGGCGGCAAGGTCAAGGGCATTCTTAAAGGCTTTAGATACTTTACTCAAATATTTGAGAGTGAAAAAGAACAAGATATTCAGATCGGATTTCCCACAGATGTAAAGCACGTGGCTCATATAGGGTGGGATGGACCCTCTGTAAATTCTCCCAGCTGGATGAACGAGTTTAAAACTTCTCCTACTGTAGATGTCCATAATAAAGGTCTAGAAAATGGAGCGAAACGAGTTGCCGAAGAATCAAGGAGAAAAAATCTTCGAGGGTCGTCAGATTTACCAAAGGCATCTAAAAGACAGTCAACGGGTGTTACGGATTCTCCGTCACGAGAAAAGACAAGCAAACCGCGAACGAGGAAAACATCGCACAAGAACAAAGATGAGATCGCCCACTCACCCCGAATACCCGAATACCCGGATCCATTTCAACTACCTCCATCCCTACCCTCACCCGATAATAATAATATTCCTAAAAAGTCTCGTCGCCATAAGACAAAGGATAATTCTGGTGGCGTCCCATCCAAATTGAGAACCAAAGCCCATTCTGGTTCGGATCCTGGATCCCCGGCCCAACCCAAGTCTAGGAACACCCATACCACCTTTGATGAAACTGAACACGATCTTTTGCTCTAA 633 0.4487 MSGGKVKGILKGFRYFTQIFESEKEQDIQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKTSPTVDVHNKGLENGAKRVAEESRRKNLRGSSDLPKASKRQSTGVTDSPSREKTSKPRTRKTSHKNKDEIAHSPRIPEYPDPFQLPPSLPSPDNNNIPKKSRRHKTKDNSGGVPSKLRTKAHSGSDPGSPAQPKSRNTHTTFDETEHDLLL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0926 210 CDD CRIB 28 61 - -
Vra8g0926 210 MobiDBLite consensus disorder prediction 70 92 - -
Vra8g0926 210 MobiDBLite consensus disorder prediction 47 210 - -
Vra8g0926 210 SMART PBD_5 30 61 IPR000095 -
Vra8g0926 210 Gene3D CRIB domain 24 66 IPR036936 -
Vra8g0926 210 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 6 181 IPR044510 -
Vra8g0926 210 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Vra8g0926 210 MobiDBLite consensus disorder prediction 49 67 - -
Vra8g0926 210 Pfam P21-Rho-binding domain 29 70 IPR000095 -
Vra8g0926 210 MobiDBLite consensus disorder prediction 138 152 - -
Vra8g0926 210 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 6 181 - -
Vra8g0926 210 MobiDBLite consensus disorder prediction 110 134 - -
Vra8g0926 210 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0926 Vra-Chr8 20575741 20577167 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0926 - - vun:114192631 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0200 3 2332798 2334178 Vra8g0926 8 20575741 20577167 PCT