Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0200 ATGTCCAACAACAACAAGGTGAAGGGTCTCCTGAAAGGTTTAAGATTCATTTCTCAGATGTTCGATGAGAAAGATTCAGACATTCAGATTGGTCATCCCACAGATGTAAAGCATCTAGCACATATCGGATGGGATGGCCAAGGTCTCTCTGACAATAACCCCTCCTGGATGAACGAGTTTAAATCTGTCCCAGGGAATTCATCTGCATCTCACAGTCGTAAAGGAGACATTAAAGAATCCAATAGTTCAATCCAAAGGGCCTCTGAAGATTCAATGGAAAGAAGTTCAAGATCTGTGAAAGGTGATGAAAGGCATTCGTTCGAGTCGGCAAAATGTAAACAACATTCAAATTCAACGGGGAATGTAAGAGAGTCTCAGGCAAAGGAAAAATCTGACAGACCAAGGCGTTCAAAAAAGTCATCAAAATCATCGCACCATTCGCATGAATCATGTCAAGCATCGAAAGATACCGACCACGACATGCACACGGGTGATAATTCCCACCAACAAGAAGACAGTGATTTGGCGGCGCCTAGAAAGTCACGTCCGAAGATGTCAAAAGATGGTTCCAATGTTGGTGGTGCCTCAAGCAAAGGAAGATCAAAATGCGAAGGCCATGGGAGACGTAGCTCCAAATTAGCTAACAAACATGAGTCTTTACAAGAAGATGGACACGTTGAGACAACAAAGTCTACAGAAGATACAGGAAAAAGTAACCTAAATGGACAGTGA 732 0.4276 MSNNNKVKGLLKGLRFISQMFDEKDSDIQIGHPTDVKHLAHIGWDGQGLSDNNPSWMNEFKSVPGNSSASHSRKGDIKESNSSIQRASEDSMERSSRSVKGDERHSFESAKCKQHSNSTGNVRESQAKEKSDRPRRSKKSSKSSHHSHESCQASKDTDHDMHTGDNSHQQEDSDLAAPRKSRPKMSKDGSNVGGASSKGRSKCEGHGRRSSKLANKHESLQEDGHVETTKSTEDTGKSNLNGQ* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0200 243 MobiDBLite consensus disorder prediction 201 232 - -
Vra3g0200 243 CDD CRIB 28 62 - -
Vra3g0200 243 Gene3D CRIB domain 24 76 IPR036936 -
Vra3g0200 243 MobiDBLite consensus disorder prediction 53 71 - -
Vra3g0200 243 SMART PBD_5 30 63 IPR000095 -
Vra3g0200 243 MobiDBLite consensus disorder prediction 90 111 - -
Vra3g0200 243 MobiDBLite consensus disorder prediction 144 186 - -
Vra3g0200 243 MobiDBLite consensus disorder prediction 53 243 - -
Vra3g0200 243 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC5-LIKE 6 224 - -
Vra3g0200 243 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 6 224 IPR044510 -
Vra3g0200 243 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Vra3g0200 243 Pfam P21-Rho-binding domain 29 81 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0200 Vra-Chr3 2332798 2334178 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0200 - - gmx:102666244 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0200 3 2332798 2334178 Vra8g0926 8 20575741 20577167 PCT