Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0907 ATGACCAGAAAAAGTTGCTACTCTCTACCCTTTGTTTTTTTCTGGTTTGTTCATCTTCTTCTTCACGTGTCAGATGCAGATATCACAAACTTGGTTTTCAAGGGCTGTGCAGAGCAAAAACTAGAGGACCCATCTGGGATATACTCACAGAACCTGAAATCCCTCTTGGATTTGTTGGTGTCAGAATCTGGAAGAAAGGCATTCTTCACTACAACCTCTGGAGAAGGCCAGAATATGATGATGGGTCTGTACCAATGCCGAGGAGACCTCTCAGACAATGATTGCTACAACTGTGTTAGCAAGATTCCTGACATGCTTGAAAACTTGTGTGGCAAGGTGGTAGCTTCACGTGTTCAGCTTACTGGATGCTACTTGAGGTATGAAATTGTTGGGTTCAAGCAGGTGACCGAGACTCAACTGCTTCACAAGGTTTGTGGGTCAAAGAATGATAGTTATGATGATGGGTTTGAGGAGAGAAGGGAGACTGCATTTGGTATGGTGGAAAGTGATGTGAAAAATGGTGGAGACTTGTTTTATACAGGGAGCTATCAGTCTTTGTATGTGTTGGGGCAGTGTGAGGGTGATTTGGGCAAAGATGATTGTGGGGATTGTATGAAAAGTGCTGAGGATCAAGCCATGGCAGAGTGTGGTGACTCTATTTCTGCACAAATTTATCTACACAAATGTTTCATTAGCTACAGCTTTTATTCTAAGAGAGGAGGCTCATCTTCTGCAGGACGACTCGGACAGGCAGAGACACAAAGGACTGTAGCTCTTGTTGTTGGAGGGTTTGCAGCTTTAGGTTTCTTAATTGCTTCTTTTTTATTTCTCAAGTCAGTGCTTAAGAGAAAAGGTGAAAAGTATTGA 867 0.4279 MTRKSCYSLPFVFFWFVHLLLHVSDADITNLVFKGCAEQKLEDPSGIYSQNLKSLLDLLVSESGRKAFFTTTSGEGQNMMMGLYQCRGDLSDNDCYNCVSKIPDMLENLCGKVVASRVQLTGCYLRYEIVGFKQVTETQLLHKVCGSKNDSYDDGFEERRETAFGMVESDVKNGGDLFYTGSYQSLYVLGQCEGDLGKDDCGDCMKSAEDQAMAECGDSISAQIYLHKCFISYSFYSKRGGSSSAGRLGQAETQRTVALVVGGFAALGFLIASFLFLKSVLKRKGEKY* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0907 288 ProSiteProfiles Gnk2-homologous domain profile. 138 238 IPR002902 -
Vra8g0907 288 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Vra8g0907 288 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 11 285 - -
Vra8g0907 288 Pfam Salt stress response/antifungal 40 128 IPR002902 -
Vra8g0907 288 Pfam Salt stress response/antifungal 152 235 IPR002902 -
Vra8g0907 288 Gene3D - 136 237 IPR038408 -
Vra8g0907 288 Gene3D - 28 132 IPR038408 -
Vra8g0907 288 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0907 Vra-Chr8 20179210 20180570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0907 68 237 Receptor kinase-like Gene Family AT4G23140 29.282 2.47e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0907 - - gmx:100795002 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0907 8 20179210 20180570 Vra8g0907 8 20179210 20180570 ECH
Vra3g0298 3 3541220 3542722 Vra8g0907 8 20179210 20180570 PCT