Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0675 ATGGCAAGGGTGTCCACAGATCCACTAGTTATTGGGAGAGTCATAGGAGATGTTCTTGATTCTTTCACTCCAAGCACAAAAATGACTGTAACATACAGTAAGAAGCAAGTCCACAATGGCCATGAACTCATTCCTTCCACAGTTACCACATGCCCAAGGATTATGACAGACCCTGATGTCCCAGGACCTAGTGACCCTTATCTGAGAGAACATCTGCACTGGATGGTGACAGACATACCAGGCACAACAAATGCCTCATTTGGGAATGTGTTGGTGAGCTATGAAATGCCAAAGCCTAACATAGGGATACACAGGTTTGTGTTTGTCCTGTTCAAGCAAAAACGTAGGCAGTGTGTTACTCCACCCTCTTCGAGGGACAACTTTAACACTCGAAAATTCTCATCTGAGAACGATCTTGGCCTCCCTGTTGCTGCTGTCTACTTCAATGCACAGAGGGAAACTGCTGCAAGAAGACGCTAA 480 0.4562 MARVSTDPLVIGRVIGDVLDSFTPSTKMTVTYSKKQVHNGHELIPSTVTTCPRIMTDPDVPGPSDPYLREHLHWMVTDIPGTTNASFGNVLVSYEMPKPNIGIHRFVFVLFKQKRRQCVTPPSSRDNFNTRKFSSENDLGLPVAAVYFNAQRETAARRR* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0675 159 CDD PEBP_euk 26 150 IPR035810 -
Vra8g0675 159 PANTHER PROTEIN TERMINAL FLOWER 1 4 158 IPR031114 GO:0003712|GO:0009910
Vra8g0675 159 SUPERFAMILY PEBP-like 13 153 IPR036610 -
Vra8g0675 159 Pfam Phosphatidylethanolamine-binding protein 54 148 IPR008914 -
Vra8g0675 159 Gene3D - 1 159 IPR036610 -
Vra8g0675 159 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 4 158 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0675 Vra-Chr8 11745692 11746918 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0675 K06910 - gmx:100787529 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0675 8 11745692 11746918 Vra8g0675 8 11745692 11746918 ECH
Vra3g0537 3 6037397 6039189 Vra8g0675 8 11745692 11746918 PCT