Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0537 ATGGCAAGAATGCCTTTGGAACCTCTTATAGTGGGGAGAGTCATAGGAGAGGTTCTTGACTCTTTTACCACAACCACAAAAATGACTGTGACTTATAACAAAAAGCAAGTCTACAATGGCCATGAGTTTTTCCCTTCATCTATCAACATCAAACCCAAGGTTGAGATTGAGGGTGATGATATGAGATCCTTTTTCACACTGATCATGACAGACCCTGATGTTCCAGGCCCTAGTGACCCTTATCTGAGAGAACACTTGCACTGGATAGTGACAGACATTCCAGGCACAACAGATGCTACATTTGGGAAAGAGTTGGTGAGCTATGAGATCCCGAAACCTAATATTGGGATCCATAGGTTTGTGTTTGTCCTGTTCAAGCAAAAGCGTAGGCAGTGTGTTACTCCACCAACTTCAAGGGATCAGTTCAACACACGCAGTTTCGCAGCACAGAACGAGCTTGGGCTCCCAGTGGCTGCTGTCTACTTCAATGCACAGAGGGAAACGGCTGCAAGAAGACGCTAG 522 0.4559 MARMPLEPLIVGRVIGEVLDSFTTTTKMTVTYNKKQVYNGHEFFPSSINIKPKVEIEGDDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVTPPTSRDQFNTRSFAAQNELGLPVAAVYFNAQRETAARRR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0537 173 PANTHER PROTEIN TERMINAL FLOWER 1 3 172 IPR031114 GO:0003712|GO:0009910
Vra3g0537 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 3 172 IPR035810 -
Vra3g0537 173 CDD PEBP_euk 33 164 IPR035810 -
Vra3g0537 173 Gene3D - 2 173 IPR036610 -
Vra3g0537 173 Pfam Phosphatidylethanolamine-binding protein 48 162 IPR008914 -
Vra3g0537 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Vra3g0537 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0537 Vra-Chr3 6037397 6039189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0537 K06910 - pvu:PHAVU_001G189200g 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0537 3 6037397 6039189 Vra3g0537 3 6037397 6039189 ECH
Vra3g0537 3 6037397 6039189 Vra8g0675 8 11745692 11746918 PCT