Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0320 ATGGCTTCTAATGGAGAAAATCTTGCTCAGAAAAACCAAGTGGTGGTGGTTTTGATACCTTTCTCTGCACAAGGCCATCTCAATCAGCTTCTGCATCTCTCAAACCTTATCTCATCACACAACATACCAGTTCATTATGTTTCCACTGNCNCTCACATTCGCCAAGCCACACTTCGACATCACGAATCCATTTCTAACATTCATTTCCATGCCTTTGATGTTCCAACCTTTGTTTCCCCTTCTCCCGATCCAGAAAGCGATTTCCCATNTCATCTAATTCCCTCCTTTGAGGCCTCTATGCATCTTCGAGACCCTGTCAGGAAACTGCTTCTATCCCTCTCCTCTGAAACCAAAAGGGTTATAGTCATCCATGACTCTGCCATGGCTTCAGTGGCACAAGATGCCACAAACATACCTAATGTTGAGAATTACACTTTTCACATCACATGCGCCTTTAGCGTCTACGTTCACTATTGGAACAGAATTGGAAGGCCTTCGGTTGAAGCCATGAACGCCCTTAAAGTTCCTTCTCTGGAAGGATGCTTCCCAACCCAATTCTTGGATTTCCTTATTACACAAAGAGATTTTCTCAAATTCAGTGATGGATTCATCTGCAACACAAGCAGGGTGATTGATGGTGATTACATTGAGTTGATGGAGGTTGTCACTGCTGGTAAAAAGATTTGGGCACTGGGACCGTTCAACCCTTTAGCCGTTGAGAAGAAAGATTCAAAAGAAAGGCACTCATGCATNGAGTGGCTTGATAAACAAGAGCNTAATTCAGTGATNTATGTGTCTTTTGGGACAACAACAACTTTGAAAGTGGAACAGATCCATGAGGTTGCAACTGGGTTGGAACAAAGCAAGCAGAAGTTCATCTGGGTGGTGAGAGATGCTGATAAAGGGGACATCTTTGATGAAAATGAAGCAAAAAGACTTGATCTTCCAATTGGGTTCGANGAGAGAGTGAACGGCGTGGGGGTGGTTGTGAGGGATTGGGCACCCCAATTGGAAATTCTGAGCCACCCTTCAACAGGAGGGTTTATGAGCCATTGTGGATGGAACTCGTGCTTGGAGAGCATAACCATGGGAGTGCCAATAGCAACATGGCCAATGCACTCTGACCAACCAAGTAACGCAGCTCTGATAACAGAGATTCTGAAGGTTGGTTTGGTTGTGAAGGATTGGTCAGAGAGGAAAGCGTTGGTGACTGCATCAGATGTTGAGAACGGTGTGAGAAGGTTGATGCAAACAAAGGAAGGTGATGAGATGAGAGAGAGAGCAACGAGGCTTAAAAATGGCATCCATAAGTCCGCGGAAGAAGGTGGAGTTTCTCGCGTGGAAATGGATTCTTTCATTGCTCACGTCACTAAATAA 1377 0.4452 MASNGENLAQKNQVVVVLIPFSAQGHLNQLLHLSNLISSHNIPVHYVSTXXHIRQATLRHHESISNIHFHAFDVPTFVSPSPDPESDFPXHLIPSFEASMHLRDPVRKLLLSLSSETKRVIVIHDSAMASVAQDATNIPNVENYTFHITCAFSVYVHYWNRIGRPSVEAMNALKVPSLEGCFPTQFLDFLITQRDFLKFSDGFICNTSRVIDGDYIELMEVVTAGKKIWALGPFNPLAVEKKDSKERHSCXEWLDKQEXNSVXYVSFGTTTTLKVEQIHEVATGLEQSKQKFIWVVRDADKGDIFDENEAKRLDLPIGFXERVNGVGVVVRDWAPQLEILSHPSTGGFMSHCGWNSCLESITMGVPIATWPMHSDQPSNAALITEILKVGLVVKDWSERKALVTASDVENGVRRLMQTKEGDEMRERATRLKNGIHKSAEEGGVSRVEMDSFIAHVTK* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0320 458 CDD GT1_Gtf-like 16 446 IPR002213 GO:0008194
Vra8g0320 458 PANTHER GLYCOSYLTRANSFERASE 4 458 - -
Vra8g0320 458 ProSitePatterns UDP-glycosyltransferases signature. 333 376 IPR035595 -
Vra8g0320 458 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 15 457 - -
Vra8g0320 458 Gene3D Glycogen Phosphorylase B; 252 439 - -
Vra8g0320 458 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 250 419 IPR002213 GO:0008194
Vra8g0320 458 PANTHER GLYCOSYLTRANSFERASE 4 458 - -
Vra8g0320 458 Gene3D Glycogen Phosphorylase B; 9 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0320 Vra-Chr8 4151348 4154149 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0320 17 445 Glycosyltransferase AT2G36770 30.271 1.73e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0320 K13495 K13492 gmx:100791957 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0294 3 3461331 3463170 Vra8g0320 8 4151348 4154149 PCT