Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0308 ATGTCTAGCTCAGCAAAAGTTTTGGACCCTGCATTTCAGGGAGTTGGTCAAAGAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCTTTGCCCAAATCTGATCATGGGAAATTCTACATGGGAGATTCTTATATCATCTTGCAGACAACTCAAGGCAAAGGTGGCACTTATTTTTATGATTTGCATTTCTGGATTGGAAAAGATACAAGTCAAGATGAGGCTGGAACTGCAGCCATTAAAACTGTTGAACTAGATGCTGCTCTTGGAGGGCGTGCAGTGCAGCACAGGGAAATCCAAGGACATGAATCTGACAAGTTTTTGTCATACTTTAAACCATGTATAATACCATTAGCGGGTGGTGTGGCATCTGGGTTTACAAAACCTGAAGAAGAGGAGTTTGAAACACGTTTATATGTATGCAAAGGGAAAAGAGTTGTTAGATTGAGACAGATCCCTTTTGCAAGGTCTTCATTAAATCATGATGATGTATTCATAGTCGACACTGAGAATAAGATATTCCAGTTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAATCTTTGGAAGTTATACAATTCCTTAAAGAAAAATATCATAAAGGGAAATGTGATGTTGCAATTGTTGATGATGGTAAGTTAGACACAGAGTCGGACTCAGGTGAGTTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATCAGTGAGGATGATGTTATTCCAGAGTCAGTTCCTGCTCAGCTTTATAGTATTGCTAATGGTGAGGTTACCCCCGTGGAAGGTGAACTGTCTAAATCATTGTTGGAAAACAACAAATGCTATCTATTGGACTGTGGTGCTGAGATATTTGTCTGGGTTGGTCGGGTAACTCAAGTAGAAGAACGAAAAGCAGCCTGCCAAGCCATTGAGGAGTTTGTTGCAAGCCAACATAGGCCAAAATCTACAAGGATAACCAGGATTATTCAAGGTTACGAAACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCTGGATCTGCTAATACCAATGCAGAGGAAGGAAGAGGGAAAGTTGCAGCACTGCTTAAGCAACAAGGTATGGGTGTCAAAGGAATGGCCAAAAGTACCCCTGTAAATGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGGAAGATAGAGGTATGGCGAATTAATGGAGATGCCAAGACTGCATTGCCAAAGGAGGAGATTGGTAAATTTTATACTGGAGATTGTTATATTGTACTGTACACATACCATACCGGTGAGAGGAAAGAAGACTTATTCTTGTGCTGTTGGTTTGGTAAAGACAGCATCAAGGAGGACCAAACAACTGCTACTCGGTTGGCCAACACAATGTATACCTCATTAAAGGGTAGACCTGTACAGGGTCGCATATTTGAAGGCAAAGAGCCACCACAATTTGTTGCTATTTTCCAACCAATGGTGGTACTTAAGGGAGGATTGAGCTCCGGGTACAAGAAATTATTAGCAGACAAAGGTGCATCAGATGAGACATATACAGCAGAGTGTATTGCACTTATTCGAATCTGTGGAACTTCTATTCATAACAATAAATCTTTGCAAGTTGATGCGGTGCCAGCATCGTTGAATTCTGCTGAGAGTTTTGTCCTGCAGTCTGGCTCTACAGTTTTTATCTGGCATGGGAATCAGTGTTCTTTTGAGCAGCAACAGCTAGCAGCAAAGGTTGCCGAATTTTTAAGGCCTGGAGTTACTCTAAAGCATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTCTGCACTTGGAGGAAAACAAGCTTACACCAGCAAGAAAGTTGTTAACGAAGTTGTCAGAGATCCACATTTGTTCACCATATCATTTTATAAAGGAAAGTTCAAGGTAGAGGAGGTTTACAACTTCTCTCAAGATGACCTGCTACCAGAGGATATCCTTGTACTTGACACACATGCAGAAGTGTTTATTTGGGTCGGTAATTCTGTGGACCCAAAAGAAAAGCAAAATGCTTTTGAAATTGGTCAGAAATACATAGATATGGCTGCATCTCTGGAGGGACTATCTCCACAAGTACCAGTATATAAAGTAACAGAGGGGAATGAACCTTGCTTTTTCACAACATACTTTTCTTGGGATCATGCAAAAGCTGTGGTTCAGGGGAACTCATTTCAGAAAAAGGTGGCGTTACTCTTTGGGATTGGCCATGCTGTCGAGGATAAGTCAAATGGATCAAGTCTGGGGGGACCAAGACAAAGAGCTGAAGCATTGGCTGCTTTGAACAATGCATTTAGTTCATCATCTGAGAAAGCATCCAGTATGACACAAGATAGATTGAATGGGTTAAGCCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTAGCTGCTTTGAACTCTGCATTTAATTCATCATCTGGTACAAAACCTGTAACTCCTCCTAAGGCATCTGGAAAAGGTCAAGGATCACAAAGAGCAGCAGCAGTGGCTGCTCTTTCATCAGTTCTTACTGCTGAAAAGAAGAAAATATCACCCGATGGTTCTCCTGTGGCTAGCAGTAGTCCTCTCACAGAAAATAGCCCCACGGTTCTTGCTGCAGAAGCTAAAAGTGAATCCTCTGAAGTTGAAGAAGTTGCAGAGGCCAAGGAAACAACAGAGGAACTTGCCCCTGAAACTGCTAGCAATGAGGATATGGAACCAAAACAAGAAAACGTGGAGGAGTCGAATGGTAGTCAAAGGACGTTTACTTATGAACAATTAAAGACTAGATCTGGTATTGATGTGGCTGGAATTGATCTTAAACGGAGGGAGGCCTATCTATCGGAGGAGGACTTCAACACTATATTTGGAATGGAAAAAGACGCATTTTATAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAATTCGAATTGTTCTAG 2943 0.4166 MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQTTQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKTVELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLAGGVASGFTKPEEEEFETRLYVCKGKRVVRLRQIPFARSSLNHDDVFIVDTENKIFQFNGANSNIQERAKSLEVIQFLKEKYHKGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDVIPESVPAQLYSIANGEVTPVEGELSKSLLENNKCYLLDCGAEIFVWVGRVTQVEERKAACQAIEEFVASQHRPKSTRITRIIQGYETHSFKSNFDSWPSGSANTNAEEGRGKVAALLKQQGMGVKGMAKSTPVNEEIPPLLEGGGKIEVWRINGDAKTALPKEEIGKFYTGDCYIVLYTYHTGERKEDLFLCCWFGKDSIKEDQTTATRLANTMYTSLKGRPVQGRIFEGKEPPQFVAIFQPMVVLKGGLSSGYKKLLADKGASDETYTAECIALIRICGTSIHNNKSLQVDAVPASLNSAESFVLQSGSTVFIWHGNQCSFEQQQLAAKVAEFLRPGVTLKHAKEGTESSAFWSALGGKQAYTSKKVVNEVVRDPHLFTISFYKGKFKVEEVYNFSQDDLLPEDILVLDTHAEVFIWVGNSVDPKEKQNAFEIGQKYIDMAASLEGLSPQVPVYKVTEGNEPCFFTTYFSWDHAKAVVQGNSFQKKVALLFGIGHAVEDKSNGSSLGGPRQRAEALAALNNAFSSSSEKASSMTQDRLNGLSQGGPRQRAEALAALNSAFNSSSGTKPVTPPKASGKGQGSQRAAAVAALSSVLTAEKKKISPDGSPVASSSPLTENSPTVLAAEAKSESSEVEEVAEAKETTEELAPETASNEDMEPKQENVEESNGSQRTFTYEQLKTRSGIDVAGIDLKRREAYLSEEDFNTIFGMEKDAFYKLPRWKQDMLKKKFELF* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0308 980 Gene3D Severin 133 246 IPR029006 -
Vra8g0308 980 Pfam Villin headpiece domain 945 980 IPR003128 GO:0003779|GO:0007010
Vra8g0308 980 Gene3D Severin 614 735 IPR029006 -
Vra8g0308 980 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Vra8g0308 980 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Vra8g0308 980 MobiDBLite consensus disorder prediction 853 873 - -
Vra8g0308 980 SMART VILL_6 19 117 IPR007122 GO:0051015
Vra8g0308 980 SMART VILL_6 137 234 IPR007122 GO:0051015
Vra8g0308 980 SMART VILL_6 520 607 IPR007122 GO:0051015
Vra8g0308 980 SMART VILL_6 624 719 IPR007122 GO:0051015
Vra8g0308 980 SMART VILL_6 392 490 IPR007122 GO:0051015
Vra8g0308 980 SMART VILL_6 252 344 IPR007122 GO:0051015
Vra8g0308 980 SUPERFAMILY VHP, Villin headpiece domain 912 980 IPR036886 GO:0003779|GO:0007010
Vra8g0308 980 CDD gelsolin_S4_like 386 487 - -
Vra8g0308 980 SMART VHP_1 945 980 IPR003128 GO:0003779|GO:0007010
Vra8g0308 980 MobiDBLite consensus disorder prediction 803 818 - -
Vra8g0308 980 Gene3D Severin 247 359 IPR029006 -
Vra8g0308 980 Gene3D Severin 5 132 IPR029006 -
Vra8g0308 980 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Vra8g0308 980 Gene3D Severin 525 613 IPR029006 -
Vra8g0308 980 Pfam Gelsolin repeat 635 713 IPR007123 -
Vra8g0308 980 Pfam Gelsolin repeat 29 111 IPR007123 -
Vra8g0308 980 Pfam Gelsolin repeat 411 483 IPR007123 -
Vra8g0308 980 Pfam Gelsolin repeat 538 583 IPR007123 -
Vra8g0308 980 Pfam Gelsolin repeat 266 337 IPR007123 -
Vra8g0308 980 Pfam Gelsolin repeat 153 217 IPR007123 -
Vra8g0308 980 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Vra8g0308 980 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Vra8g0308 980 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Vra8g0308 980 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Vra8g0308 980 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Vra8g0308 980 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Vra8g0308 980 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Vra8g0308 980 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Vra8g0308 980 MobiDBLite consensus disorder prediction 844 924 - -
Vra8g0308 980 MobiDBLite consensus disorder prediction 876 912 - -
Vra8g0308 980 CDD gelsolin_S5_like 520 608 - -
Vra8g0308 980 PANTHER VILLIN 1 980 IPR007122 GO:0051015
Vra8g0308 980 CDD gelsolin_S3_like 254 343 - -
Vra8g0308 980 PANTHER VILLIN-3-LIKE ISOFORM X1 1 980 - -
Vra8g0308 980 MobiDBLite consensus disorder prediction 774 831 - -
Vra8g0308 980 SUPERFAMILY Actin depolymerizing proteins 134 238 - -
Vra8g0308 980 ProSiteProfiles Headpiece (HP) domain profile. 915 980 IPR003128 GO:0003779|GO:0007010
Vra8g0308 980 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Vra8g0308 980 MobiDBLite consensus disorder prediction 774 790 - -
Vra8g0308 980 CDD gelsolin_S6_like 622 720 - -
Vra8g0308 980 Gene3D Severin 388 524 IPR029006 -
Vra8g0308 980 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Vra8g0308 980 CDD gelsolin_S1_like 12 124 - -
Vra8g0308 980 Gene3D Villin headpiece domain 902 980 IPR036886 GO:0003779|GO:0007010
Vra8g0308 980 CDD gelsolin_S2_like 138 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0308 Vra-Chr8 3942223 3955276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0308 - - gmx:100788765 1698.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0280 3 3177889 3188597 Vra8g0308 8 3942223 3955276 PCT