Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0280 ATGTCTAGTGCTACAAAAGTTTTGGATCCAGCATTCCAGGGAGTTGGCCAAAAAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAACCAGTTCCATTGCCCAGATCTGAATATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGGGCTTATTTTTATGATATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAAGCTGGAACAGCAGCCATCAAAACTGTTGAACTTGATGCATCTCTTGGAGGACGTGCAGTGCAATACAGGGAAATTCAAGGGCATGAATCAGACAAATTTTTGTCATACTTTAAGCCATGTATAATACCATTAGAGGGTGGTGTCGCATCTGGATTTAAAAAACCTGAAGAAGAGGAGTTTGAAACACGTTTGTATGTATGCAGAGGAAAACGAGTTGTCAGAATAAAACAGGTCCCTTTCGCACGGTCTTCGCTGAATCATGACGATGTGTTCATCCTAGATACTCAGAATAAGATTTATCAATTCAATGGTGCTAACTCCAATATCCAGGAAAGAGCCAAGGCTCTGGAAGTTATTCAGTTGTTGAAGGAAAAGTATCATGAAGGAAAATGCGATGTTGCAATTGTTGATGATGGCAAGCTGGATACTGAGTCAGATTCAGGTGAATTCTGGGTTCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATTGGTGAGGATGATATTGTCCCAGAGGCCATTCCTGCTCAACTTTATAGTATTGTTGATGGTGAGGTCAAGCCTGTAGAAGGTGAACTTTCAAAATCACTGTTAGAGAACTACAAATGCTATCTATTGGACTGTGGCGCTGAGGTATTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAAAGAAAAGCAGCATGTCAAGCAGCTGAGGAGTTTGTTGCAAGTCAAAAAAGGCCAAAATCTACGAGGATTACCAGAATTATTCAAGGATATGAAACACATTCATTTAAGTCCAACTTTGACTCTTGGCCATCAGGGTCTGCAACTACCAGTGCTGATGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAACAACAAGGTATGGGTGTGAAAGGCGCGGCAAAAAGTACCCCAGTTGTTGAAGAAATTCCACCTTTGCTTGAAGGAGGCGGAAAGATGGAGGTATGGCAAATCAATGGAAGTGCTAAGACTCCATTACCTAAGGAAGATATTGGTAAATTCTATAGTGGAGATTGTTACATAGTGCTCTACACTTATCACTCTAGCGAGAGGAAGGAAGACTACTATTTGTGCAGTTGGTTTGGAAAAGACAGTGTTGAGGAGGACCAAAGGATGGCTATTCGATTGGCTACTACAATGTTCAACTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGATGGTAAAGAGCCACCACAGTTTATTGCTCTTTTCCAACCAATGGTGGTCCTCAAGGGAGGCTTGAGCTCTGGTTACAAAAAATTTATAGCAGATAAAGGCTTGCCAGATGAGACATACACAGCAGACAGTGTTGCACTTATTCGAATTTCAGGAACATCTCCTCATAATAATAAAGTGGTGCAAGTAGATGCAATTGCAGCATCGTTGAATTCTACCGAATGTTTTGTTTTGCAATCTGGCTCAGCTGTTTTCACTTGGCATGGGAATCAATGCTCCCTAGAGCAGCAGCAGCTTGCAACAAAAGTTGCTGAATTTTTAAAGCCAGGAGTTTCTCTAAAGCTTGCTAAAGAAGGAACAGAAACCTCAGCTTTCTGGTTTGCAGTTGGGGGAAAACAAAGTTATACCAGCAAAAAGGCCACTAATGACATTGTCCGAGACGCACATTTGTTCACTTTCTCTTTCAATAGAGGAAAATTGCAGGTGGAGGAGATTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATCCTCATACTTGACACGCACGCCGAAGTTTTCGTTTGGATTGGTCAGTGTGTGGATCCAAAAGAAAAGCAAAATGCATTTGAAATTGCCCAGAAATACATAGATAAGGCTGCATCTCTGGATGGACTATCTCCTCAAGTTCCACTATATAAAGTAACAGAAGGGAATGAACCGTGCTTTTTCACTGCATATTTTTCTTGGGATCATGCAAAAGCTTTGGTTCCAGGGAACTCCTTCCAGAAAAAGGTGACATTACTCTTCGGGATTGGCCATGCTGTAGAGGAAAAGTCTAATGGGTCCAGTCAAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTAAACAGCGCATTTAAGTCATCTCCTGAGGCAGCAGCTAGTGCGGATAAGTTAAACGGGCTAAATCAAGGAGGGCCAAGACAAAGGGCTGAAGCCTTAGCAGCCTTAAACTCTGCATTTAATTCATCATCTGGAGCCAAAATTTATACACCTAGGTCTTCTGGAAGAAGTCAGGGATCACAGAGAGCAGCAGCAGTAGCTGCTCTTTCTTCAGTTCTTACTGCAGAAAAGAAGAAAACTTCACCCGAAACTTCTCCTGTGGCAAGCACCAGTCCTGTTGTGGAAAATAGTAACTTTGGTGAGAAACATGGCTCAATTCCAGATACTAAAAGTGAGAGTGCCCCTTCTGAAACGGATGTTGTTGAAGAAGTTGTTCCCCAAGTCAAGGAGACAGAAGAATCAGCCACTGAAACTGGCACAAACGGGGATTCAGAACCAAAACAAGAAAATGTGGATAATGGAGGAAATGACAGTGAAAATAATCAAAATGTCTTCAGTTATGAGCAACTAAAGACTAAATCTGGTAGTGTTGTGTCTGGAATTGATCTTAAACGGAGAGAGGCATATCTGTCAGACAAAGAGTTCGAAACTGTATTTGGAATGAGCAAAGAGGCATTCACTAAGTTACCAAGATGGAAGCAAGACATGCTGAAAAGAAAAGTGGATCTGTTCTAG 2973 0.4191 MSSATKVLDPAFQGVGQKVGTEIWRIENFQPVPLPRSEYGKFYMGDSYIILQTTQGKGGAYFYDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQYREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYVCRGKRVVRIKQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQLLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVIGEDDIVPEAIPAQLYSIVDGEVKPVEGELSKSLLENYKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQKRPKSTRITRIIQGYETHSFKSNFDSWPSGSATTSADEGRGKVAALLKQQGMGVKGAAKSTPVVEEIPPLLEGGGKMEVWQINGSAKTPLPKEDIGKFYSGDCYIVLYTYHSSERKEDYYLCSWFGKDSVEEDQRMAIRLATTMFNSLKGRPVQGRIFDGKEPPQFIALFQPMVVLKGGLSSGYKKFIADKGLPDETYTADSVALIRISGTSPHNNKVVQVDAIAASLNSTECFVLQSGSAVFTWHGNQCSLEQQQLATKVAEFLKPGVSLKLAKEGTETSAFWFAVGGKQSYTSKKATNDIVRDAHLFTFSFNRGKLQVEEIYNFSQDDLLTEDILILDTHAEVFVWIGQCVDPKEKQNAFEIAQKYIDKAASLDGLSPQVPLYKVTEGNEPCFFTAYFSWDHAKALVPGNSFQKKVTLLFGIGHAVEEKSNGSSQGGPRQRAEALAALNSAFKSSPEAAASADKLNGLNQGGPRQRAEALAALNSAFNSSSGAKIYTPRSSGRSQGSQRAAAVAALSSVLTAEKKKTSPETSPVASTSPVVENSNFGEKHGSIPDTKSESAPSETDVVEEVVPQVKETEESATETGTNGDSEPKQENVDNGGNDSENNQNVFSYEQLKTKSGSVVSGIDLKRREAYLSDKEFETVFGMSKEAFTKLPRWKQDMLKRKVDLF* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0280 990 PANTHER VILLIN-3-LIKE ISOFORM X1 1 990 - -
Vra3g0280 990 MobiDBLite consensus disorder prediction 840 930 - -
Vra3g0280 990 Gene3D Severin 248 358 IPR029006 -
Vra3g0280 990 SUPERFAMILY Actin depolymerizing proteins 519 611 - -
Vra3g0280 990 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Vra3g0280 990 CDD gelsolin_S2_like 139 232 - -
Vra3g0280 990 SMART VHP_1 955 990 IPR003128 GO:0003779|GO:0007010
Vra3g0280 990 Gene3D Severin 614 729 IPR029006 -
Vra3g0280 990 SUPERFAMILY VHP, Villin headpiece domain 917 990 IPR036886 GO:0003779|GO:0007010
Vra3g0280 990 Gene3D Villin headpiece domain 913 990 IPR036886 GO:0003779|GO:0007010
Vra3g0280 990 Gene3D Severin 389 516 IPR029006 -
Vra3g0280 990 Gene3D Severin 519 613 IPR029006 -
Vra3g0280 990 MobiDBLite consensus disorder prediction 897 930 - -
Vra3g0280 990 CDD gelsolin_S4_like 386 487 - -
Vra3g0280 990 CDD gelsolin_S6_like 624 720 - -
Vra3g0280 990 MobiDBLite consensus disorder prediction 840 880 - -
Vra3g0280 990 Pfam Villin headpiece domain 955 990 IPR003128 GO:0003779|GO:0007010
Vra3g0280 990 Gene3D Severin 133 245 IPR029006 -
Vra3g0280 990 ProSiteProfiles Headpiece (HP) domain profile. 925 990 IPR003128 GO:0003779|GO:0007010
Vra3g0280 990 CDD gelsolin_S5_like 518 609 - -
Vra3g0280 990 SUPERFAMILY Actin depolymerizing proteins 382 530 - -
Vra3g0280 990 Pfam Gelsolin repeat 405 484 IPR007123 -
Vra3g0280 990 Pfam Gelsolin repeat 264 337 IPR007123 -
Vra3g0280 990 Pfam Gelsolin repeat 150 217 IPR007123 -
Vra3g0280 990 Pfam Gelsolin repeat 532 583 IPR007123 -
Vra3g0280 990 Pfam Gelsolin repeat 639 713 IPR007123 -
Vra3g0280 990 Pfam Gelsolin repeat 29 111 IPR007123 -
Vra3g0280 990 SMART VILL_6 19 117 IPR007122 GO:0051015
Vra3g0280 990 SMART VILL_6 624 719 IPR007122 GO:0051015
Vra3g0280 990 SMART VILL_6 251 344 IPR007122 GO:0051015
Vra3g0280 990 SMART VILL_6 518 607 IPR007122 GO:0051015
Vra3g0280 990 SMART VILL_6 139 234 IPR007122 GO:0051015
Vra3g0280 990 SMART VILL_6 392 490 IPR007122 GO:0051015
Vra3g0280 990 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Vra3g0280 990 CDD gelsolin_S3_like 254 343 - -
Vra3g0280 990 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Vra3g0280 990 CDD gelsolin_S1_like 12 124 - -
Vra3g0280 990 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Vra3g0280 990 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Vra3g0280 990 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Vra3g0280 990 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Vra3g0280 990 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Vra3g0280 990 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Vra3g0280 990 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Vra3g0280 990 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Vra3g0280 990 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Vra3g0280 990 PANTHER VILLIN 1 990 IPR007122 GO:0051015
Vra3g0280 990 Gene3D Severin 5 132 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0280 Vra-Chr3 3177889 3188597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0280 - - pvu:PHAVU_001G131700g 1891.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0280 3 3177889 3188597 Vra8g0308 8 3942223 3955276 PCT