Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0296 ATGCTGAATTATCAAACACCTTCCACAAGCCATGACAGAGAGGAACAAAGCGACTACACTGATAATGAACAACAAATCAGAGAAATTCATGCCCTGACTCCACCCCCAAGAAGAGAGCCTAACTGGGAAACACACACACACAGCCACCGCTCTTCTTCTGTGTCCATAGAAGGTGCTTCCAGCGAGAACTTCAGCGTGAGTAGGGAATTCAGTGCCCTGGTTCTAGCAGGCTCAAGTATTGATCACAACACCACCACCCCTAGTCCCATGAGTGTGAATATGATGCATGGCAATGAAGGAGGTGCTAATAGCAGCATTAACAACGACAACAACAATAGCAACAACTTGGGGAGGATTGGAGAGGATGAGTTGCTGATGATGGAAGAGACTAACCCTTTGGCTATTGTGGCAGATAGCAACCCTTTGGGAGCTGATTCCTCATCATCACCTCCGAGGCGTGGAGGGAACTCTTCTTCTTCAGCTTCTGGTACTGCTCTGAGTGAGGTCACAGTGCAGAGGGTGAGAAAGGAGGAGGTTGAAGCAAAGATATCAGCTTGGCAAAACGCCAAGGTTGCTAAGATTAACAACAGGTTCAAGAGGGAAGATGCTGTTATAAATGGGTGGGAGAATGAGCAGGTCCAGAAAGCAACTTCATGGATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGAGCAAGAGCACTGGAGAAAATGCAAAATGAGATAGCAAAAGCTCACAGAAAAGCTGAGGAAAGGAAGGCATCAGCAGAGGCTAAAAGGGGCACAAAAGTAGCAAGGGTTCTGGAGATTGCCAACCTCATGAGAGCAGTTGGAAGAGCACCTACCAAAAGATCTTTCTTTTAA 864 0.4676 MLNYQTPSTSHDREEQSDYTDNEQQIREIHALTPPPRREPNWETHTHSHRSSSVSIEGASSENFSVSREFSALVLAGSSIDHNTTTPSPMSVNMMHGNEGGANSSINNDNNNSNNLGRIGEDELLMMEETNPLAIVADSNPLGADSSSSPPRRGGNSSSSASGTALSEVTVQRVRKEEVEAKISAWQNAKVAKINNRFKREDAVINGWENEQVQKATSWMKKVERKLEEKRARALEKMQNEIAKAHRKAEERKASAEAKRGTKVARVLEIANLMRAVGRAPTKRSFF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0296 287 MobiDBLite consensus disorder prediction 136 169 - -
Vra8g0296 287 Pfam Remorin, C-terminal region 178 283 IPR005516 -
Vra8g0296 287 MobiDBLite consensus disorder prediction 11 25 - -
Vra8g0296 287 MobiDBLite consensus disorder prediction 1 58 - -
Vra8g0296 287 PANTHER OS02G0116800 PROTEIN 15 286 - -
Vra8g0296 287 MobiDBLite consensus disorder prediction 141 169 - -
Vra8g0296 287 Coils Coil 220 259 - -
Vra8g0296 287 PANTHER CARBOXY-TERMINAL REGION REMORIN 15 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0296 Vra-Chr8 3807053 3809477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0296 - - vun:114191978 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0296 8 3807053 3809477 Vra8g0296 8 3807053 3809477 ECH
Vra3g0255 3 2894134 2896764 Vra8g0296 8 3807053 3809477 PCT