Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0255 ATGTTCAACGATCCATTAATCATGAGTTCAACGAGCCATGGCTCAGAGGATCATGAAGAAGAAGATGAACAAGTAAGAGAAATCCACGCCTTAACACCAACTCACCCTCCCCACCCACGTGGCAGACCCTGGGATACCCTTCACACCCACCGTTCAAGCTCCCTCTCCGTCGCCAGCACCGACGGCGGCGCCTCCTCCTCCGACAACTTCACCACCATGAGCAGAGAGTTCAACGCCTTGGTTCTCGCAGGCTCCACCATCGACCCCGACAGCAACCGCAACCTAACTCCCGTCAACCAAAACAACGTGAACAACAACCTGGGGAGGATCAGAGAAGATGAGTTGATGGAAGAGACGAACCCTTTGGCAATCGTGCCGGATAACCACCCTCTGGACCCGGTTCCCTCGTCCCAAATGGGCGGTGGTGGTGGTGCACGTGAAGAGCACGTGTCGGTGCAGAGGGTGAAGAAGGAGGAGGTGGATACGAAGATATCAGCGTGGCAGAACGCGAAGGTTGCGAAGATTAACAACAGGTTCAAGAGAGAAGACGCTGTGATCAATGGGTGGGAGAGCGAGCAGGTTCAGAAAGCTTCCTCTTGGATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGGGCAAGAGCAATGGAGAAAATGCAAAATGACATAGCAAAAGCTCATAGAAAAGCAGAGGAGAGAAGGGCATCAGCAGAAGCCAAAAGAGGAACGAAAGTGGCAAGGGTTTTGGAGATTGCAAGTCTCATGAGAGCAGTTGGAAGACCTCCTGCCAAAAAGTCCTTCTTCTAA 807 0.5217 MFNDPLIMSSTSHGSEDHEEEDEQVREIHALTPTHPPHPRGRPWDTLHTHRSSSLSVASTDGGASSSDNFTTMSREFNALVLAGSTIDPDSNRNLTPVNQNNVNNNLGRIREDELMEETNPLAIVPDNHPLDPVPSSQMGGGGGAREEHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0255 268 MobiDBLite consensus disorder prediction 1 67 - -
Vra3g0255 268 PANTHER - 15 267 - -
Vra3g0255 268 MobiDBLite consensus disorder prediction 124 156 - -
Vra3g0255 268 PANTHER OS02G0116800 PROTEIN 15 267 - -
Vra3g0255 268 MobiDBLite consensus disorder prediction 217 240 - -
Vra3g0255 268 MobiDBLite consensus disorder prediction 13 29 - -
Vra3g0255 268 Pfam Remorin, C-terminal region 159 263 IPR005516 -
Vra3g0255 268 MobiDBLite consensus disorder prediction 48 67 - -
Vra3g0255 268 Coils Coil 201 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0255 Vra-Chr3 2894134 2896764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0255 - - gmx:100527684 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0255 3 2894134 2896764 Vra3g0255 3 2894134 2896764 ECH
Vra3g0255 3 2894134 2896764 Vra8g0296 8 3807053 3809477 PCT