Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0290 ATGGGAGAAGCACCTATTGGTCAAGACCTGCAGAATGGGAATGACAATGACTTTGAATCAAAAAGCGGGACTTTTGAAACCAGCACTATCATTGGTGAAAAAAAGTATGTCATTGGTGGAACTGCTGGTGGAACTTTTTATGTGAAAGTTCAAATTCTTGACAACAACTGTCTTGGGGAATGGGTTAATGTTGTTGAGCTAGGCACTAAACCCATTTCATGTAATGGCCACTCAGCCGTGCTTTTGAAAGACAGAATACTAATTCTTAAGAAAAATTCTAACCCAGATGACTGTATATGGTTTCTGGAGGTGGACACTACATATGTCAGGCAGCAGCAGAAAAAAAATTTGGGGACTGAGGTTGTAGCATGGAGTAAGGGTGTGATAGGAAACGTGGAGAAACCTGTTGTTATAAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCTCTCCTTATGAAGGAATTCCCCTCTATGTTTGGCTTTTCTGTGAGCCACACAACCCGTGCCCCGAGAGGCATGGAGAAAGATGGGGTCCATTACCATTTTACGGAGAAGAATGTTATGGAGAAAGAGATTAAAGATGGCAAGTTTCTGGAGTTTGCTTCTGTCCATGGAAATCTCTATGGGACCAGTGTTGAGGCTGTGGAGCTGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGGGCAAGATCCGTGAGGGCTAGTCCTCTAGAAGCCATGTTCATCTTTATCTGCCCCCCATCAATGGACGAACTGGAGAAGCGTCTTCGTGACCGAGGGACTGAGACAGAAGAACAGGTCCTAAAGCGACTACGAAATGCTCAGGCTGAGATTGAGCAAGGGAGATCATCAGGCATATTTGATCACATCTTATTCAATGACAATCTTGAGGACTGTTATGAGAATCTGAAGAAATTATTGGGACTTGATGAATATGCCACTACTCCCAAGTCTGTACCAAAAGAGATAAATCTCCCAAGGGATCATTCAGTGTCAAAAATTGATGACAAAATCATCATAAATTCCACGTCTTCAAAACTAGAAAAGGAATCAAAGAACTTGATCATGTTAGACGTGTCTTGTCTTAAAGGGGGTGCACCAGGACGGACAAGAGGACTTAATATAGAAGCCATTGACTCGTTTTCAGAAGGCTTCAATGGCAATGGGAATGGACCAATTTGA 1203 0.4239 MGEAPIGQDLQNGNDNDFESKSGTFETSTIIGEKKYVIGGTAGGTFYVKVQILDNNCLGEWVNVVELGTKPISCNGHSAVLLKDRILILKKNSNPDDCIWFLEVDTTYVRQQQKKNLGTEVVAWSKGVIGNVEKPVVISGPSGVGKGTLISLLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKNVMEKEIKDGKFLEFASVHGNLYGTSVEAVELVSDAGKRCILDIDVQGARSVRASPLEAMFIFICPPSMDELEKRLRDRGTETEEQVLKRLRNAQAEIEQGRSSGIFDHILFNDNLEDCYENLKKLLGLDEYATTPKSVPKEINLPRDHSVSKIDDKIIINSTSSKLEKESKNLIMLDVSCLKGGAPGRTRGLNIEAIDSFSEGFNGNGNGPI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0290 400 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Vra8g0290 400 PANTHER GUANYLATE KINASE-RELATED 1 354 - -
Vra8g0290 400 MobiDBLite consensus disorder prediction 1 20 - -
Vra8g0290 400 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Vra8g0290 400 SMART gk_7 132 318 IPR008145 -
Vra8g0290 400 Pfam Guanylate kinase 133 314 IPR008145 -
Vra8g0290 400 Gene3D - 130 328 IPR027417 -
Vra8g0290 400 PANTHER GUANYLATE KINASE 1 1 354 - -
Vra8g0290 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Vra8g0290 400 CDD GMPK 135 311 - -
Vra8g0290 400 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Vra8g0290 400 SUPERFAMILY Galactose oxidase, central domain 23 111 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0290 Vra-Chr8 3753444 3757134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0290 K00942 - gmx:100812658 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0290 8 3753444 3757134 Vra8g0290 8 3753444 3757134 ECH
Vra3g0249 3 2821630 2824963 Vra8g0290 8 3753444 3757134 PCT