Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0272 ATGACTGCTGCTGTTGTCGTCCCACTGGGCCTTCTCTTCTTCTCCTCTGGCCTCGTCGTTAACCTCATTCAGGCAGTATGCTACGTGTTTGTGCGGCCGGTGTCGAAGAATTTGTACCGGCGGATGAACCGGGTGGTGGCGGAACTGCTTTGGTTGGAACTTGTGTGGATTATCGATTGGTGGGCCGGTGTTAAGGTCCAAGTATTCACAGATAGTGAAACTTTTCGTTTAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCACTCTTGCCGTGATGAAGAAATCCTCTAAGTTTCTACCGGTTATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCCTGGAGAGAAGTTGGGCAAAGGATGAAAGCACGCTAAAGTTGGGCCTACAACAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTATTTGTAGAAGGAACTCGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGTCTCAGCTGGATTGCCTGTTCCTAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAACCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTGGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGAGGAAAATCTTCAGTGGTGCATGTGCATATTAAGCGACATATGATGAAGGATTTGCCGGAAGAAAATGAAGCTGTTGCTCAATGGTGTCGAGATATATTTGTGGCTAAGGATGCATTGTTGGACAAACATATAGCTGAGGACACATTTAGTGACCAAGAGCTGCAGGATACCGGTCGACCTGTAAAGTCTCTTGTGGTTGTCATATCTTGGGCTTGTGTGGTTGTAACGGGGGCCATAAAGTTCCTTCAATGGTCTTCACTACTATCTTCCTGGAAGGGTGTTGCATTTTCTGCAATAGGTTTGGGAGTTGTCACTCTACTCATGCACATCTTGATTAAGTTCTCACAAGCTGAGCGTTCAACCCCTTCCAAGGTTGCCCCAGCAAAGTCCCAGACTAGGGAAGAGCTAGAGGCTAGGGATAACAAACAAGACTAG 1152 0.4575 MTAAVVVPLGLLFFSSGLVVNLIQAVCYVFVRPVSKNLYRRMNRVVAELLWLELVWIIDWWAGVKVQVFTDSETFRLMGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKLGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAVSAGLPVPRNVLIPRTKGFVSAVNHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSVVHVHIKRHMMKDLPEENEAVAQWCRDIFVAKDALLDKHIAEDTFSDQELQDTGRPVKSLVVVISWACVVVTGAIKFLQWSSLLSSWKGVAFSAIGLGVVTLLMHILIKFSQAERSTPSKVAPAKSQTREELEARDNKQD* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0272 383 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 1 373 - -
Vra8g0272 383 MobiDBLite consensus disorder prediction 358 383 - -
Vra8g0272 383 Pfam Acyltransferase 76 225 IPR002123 GO:0016746
Vra8g0272 383 MobiDBLite consensus disorder prediction 369 383 - -
Vra8g0272 383 SMART plsc_2 83 205 IPR002123 GO:0016746
Vra8g0272 383 CDD LPLAT_LCLAT1-like 55 250 - -
Vra8g0272 383 Pfam Acyltransferase C-terminus 236 309 IPR032098 -
Vra8g0272 383 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
Vra8g0272 383 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 62 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0272 Vra-Chr8 3513536 3524202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0272 1 382 Miscellaneous Gene Families AT3G57650 75.654 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0272 K13523 - gmx:100814107 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0240 3 2738403 2746925 Vra8g0272 8 3513536 3524202 PCT