Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0259 ATGGGTTGGAATCTCGTCTTCTGGCTCCTCATTTGTTTCCCTGCCAACATTGCGCTTCTCGCTTCCACTTTCTACCAGGTTTTGATTCTGTCGGATTTGGAGTCTGATTACGTCAACCCTTTCGACGCTTCGTCTCGGATTAACTACTTCGTTCTTCCGGAGTTCATTGGGCAGGGAGCATTGTGTGCTCTGTGCCTCTTCACTGGCCATTGGTTCATGTTTTTGCTCACAGTTCCTGTTACTTGCTACCATGCCAGACTGTATGTGAAAAGAGAGCATCTTATTGATGTTACTGAGGTATTTAGGGTAGTTAATGCTGAGAAGAAATTTCGGATAGTGAAACTTGCTTTATACTTAACGGTTCTCATTGTTACTATCTTCAGGCTTACATTAATCGCAGTCTACTATTTAGGCATTGAAGACGATGATGACCTAGGACACCTTTGGTAA 450 0.4333 MGWNLVFWLLICFPANIALLASTFYQVLILSDLESDYVNPFDASSRINYFVLPEFIGQGALCALCLFTGHWFMFLLTVPVTCYHARLYVKREHLIDVTEVFRVVNAEKKFRIVKLALYLTVLIVTIFRLTLIAVYYLGIEDDDDLGHLW* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0259 149 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Vra8g0259 149 PANTHER CORNICHON-RELATED 2 131 - -
Vra8g0259 149 PANTHER PROTEIN CORNICHON 2 131 - -
Vra8g0259 149 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0259 Vra-Chr8 3294650 3299609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0259 K20368 - gmx:100500341 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0259 8 3294650 3299609 Vra8g0259 8 3294650 3299609 ECH
Vra3g0230 3 2579161 2584281 Vra8g0259 8 3294650 3299609 PCT