Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0236 ATGGAAAGTATTATTACACTTCCTTTTCGTCTCTCTTCTCTCAGACATTCTTCTGCCACCCTTTCTCCCTTTCAGACAAGAGGGAGAAAGATAAATTACCTTTCACTTTTCACCTCTTATTCAGGTTGCGTGAAAATGGGAAGTGGTGGCCGAAGCTCTGCTCCAAAACAGAGAAACTCCGGTGAAGATGTGGTTTGGAAGAAGCGCGTTCCACACGAAAAACCACCATTCAGTCTGAGCAAAGTGAAGAAAGCGATTCCACCGCACTGTTTCGAGCGTTCGGTGGTTCGATCTTTCTCATACGTCTTCTACGACCTGACCATAGCCTCGTGTCTTCTGTACGTGGCGCTAAACTACTTCTCAACCCTTCCCCATAACCTCTCCCTCTTGGCCTGGCCCCTATACTGGATCCTCCAAGGTTCCGTCCTCACCGGCGTTTGGGTCATAGCGCACGAGTGTGGCCACCACGCTTTCAGCGATTACCAGTGGCTCGATGACACGGTTGGTCTCCTTCTCCATTCGTTTCTTCTGGTGCCCTATTTTTCGTGGAAATATAGCCACCGCCGCCACCACTCCAACACGGGGTCCCTCGAACGTGACGAAGTGTTTGTGCCGAAAACAAAGTCCAGAGTTGGTTGGCATTCAAAGTACCTGAACAACCCTGCTGGGAGAGTTCTCACTCTTGCCATCACCCTAACCCTAGGTTGGCCTCTCTACTTGGCCTTCAACGTTTCGGGTCGGAGCTACGAGCGTTTCGCCTGCCACTATGACCCTTATGGCCCCATTTACTCCGACCGCGAAAGGCTTCAGATTTACGTCTCCGATGTAGGGGTTCTGGCCGTGTGTTACGGCCTCTACAAGCTTGTTTTGGCAAAAGGGTTCCTTTGGGTGGTTTGTGTCTATGGGGTGCCTCTGATGGTGGTAAATGCGTTGTTGGTGTTGATCACTTTCTTGCAGCACACTCACCCTGCGGTTCCTCACTACGATTCCACGGAGTGGGATTGGCTGAGAGGCGCATTGGCCACCGTTGACAGAGATTACGGGATTCTGAACAAGGTTCTTCATAACATCACTGACACACACGTGGCACATCACTTGTTCTCCACCATGCCGCATTACCATGCAATGGAAGCCACCAACGCTATAAAACCGATTCTTGGAGATTATTATCACTTTGATGGAACTCCTATCTATAAGGCAATGTGGAGAGAGGCAAGAGAGTGCATGTACGTTGAGACTGATGAAAAGTCTAAGAACAGTGGTGTTTACTGGTACAACAATAAACTGGATTGA 1293 0.4957 MESIITLPFRLSSLRHSSATLSPFQTRGRKINYLSLFTSYSGCVKMGSGGRSSAPKQRNSGEDVVWKKRVPHEKPPFSLSKVKKAIPPHCFERSVVRSFSYVFYDLTIASCLLYVALNYFSTLPHNLSLLAWPLYWILQGSVLTGVWVIAHECGHHAFSDYQWLDDTVGLLLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKTKSRVGWHSKYLNNPAGRVLTLAITLTLGWPLYLAFNVSGRSYERFACHYDPYGPIYSDRERLQIYVSDVGVLAVCYGLYKLVLAKGFLWVVCVYGVPLMVVNALLVLITFLQHTHPAVPHYDSTEWDWLRGALATVDRDYGILNKVLHNITDTHVAHHLFSTMPHYHAMEATNAIKPILGDYYHFDGTPIYKAMWREARECMYVETDEKSKNSGVYWYNNKLD* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0236 430 PANTHER OLEATE HYDROXYLASE FAH12 46 429 - -
Vra8g0236 430 Pfam Domain of unknown function (DUF3474) 71 109 IPR021863 GO:0016717
Vra8g0236 430 CDD Delta12-FADS-like 93 375 - -
Vra8g0236 430 Pfam Fatty acid desaturase 131 391 IPR005804 GO:0006629
Vra8g0236 430 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 46 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0236 Vra-Chr8 2919167 2922296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0236 46 429 Lipid Metabolism Gene Families AT3G12120 73.438 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0236 K10256 - gmx:100780912 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0236 8 2919167 2922296 Vra8g0236 8 2919167 2922296 ECH
Vra3g0025 3 248991 254783 Vra8g0236 8 2919167 2922296 PCT