Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0230 ATGGATTCTTCTTCTGATCACTCTCCTTCGTCATCTCTTCATTCTACTGGAGATGTTCAAAACGTTAAGTTCTGTCAGTGGTGTGGTGGTCCAACGAAGCCTGGAATACCTGAAGGAGAAGAAAGATTCAGAGCCATATGTACCAGCTGTGGGAAGATTGCATATCAGAATCCAAAAATGGTAGTCGGTTGCCTCATTGAACACGATAACAAGGTCCTCCTTTGCAAGAGGAATATTGAACCATCTTATGGCCTATGGACACTTCCTGCTGGTTATCTAGAAATGGGAGAGTCAGCTAGGGAAGGTGCCATCAGGGAAACAAGGGAAGAAGCCAATGCTGAGGTGGAAGTGATTTCCCCCTTTGCTCAATTAGACATTCCTTTAATTGGCCAGACTTATATAATCTTCTTAGCAAGGTTGAAGAACCCCCATTTTTCACCTGGTCCAGAATCATCAGAATGCCAACTTTTCCCTCTCCATGAAATACCTTTCAACTCTCTATCCTTTTCATCAATGGTGGTCACTTTAAGTTTGTATGTTGAAGATAAGAAGGAAGGAGGAAAGCCTAAATTCCATTATGGTACTATTAGCAAAAGGCCTGGTACCAGTGCTTCTGACATTCATGCCTATACACTGGATCATCATATGCAGTCATGA 657 0.4247 MDSSSDHSPSSSLHSTGDVQNVKFCQWCGGPTKPGIPEGEERFRAICTSCGKIAYQNPKMVVGCLIEHDNKVLLCKRNIEPSYGLWTLPAGYLEMGESAREGAIRETREEANAEVEVISPFAQLDIPLIGQTYIIFLARLKNPHFSPGPESSECQLFPLHEIPFNSLSFSSMVVTLSLYVEDKKEGGKPKFHYGTISKRPGTSASDIHAYTLDHHMQS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0230 218 Coils Coil 217 218 - -
Vra8g0230 218 Gene3D - 20 56 - -
Vra8g0230 218 ProSitePatterns Nudix box signature. 91 112 IPR020084 GO:0016787
Vra8g0230 218 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 57 209 - -
Vra8g0230 218 ProSiteProfiles Nudix hydrolase domain profile. 57 180 IPR000086 -
Vra8g0230 218 PANTHER BNAA03G19740D PROTEIN 11 217 - -
Vra8g0230 218 PANTHER NUDIX HYDROLASE 23 11 217 - -
Vra8g0230 218 SUPERFAMILY Nudix 23 186 IPR015797 -
Vra8g0230 218 Pfam Nudix N-terminal 23 56 IPR029401 -
Vra8g0230 218 Pfam NUDIX domain 61 162 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0230 Vra-Chr8 2832682 2837830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0230 K18453 - gmx:100777180 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0230 8 2832682 2837830 Vra8g0230 8 2832682 2837830 ECH
Vra3g0031 3 297560 301763 Vra8g0230 8 2832682 2837830 PCT