Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0222 ATGGCTGATGCTACCAAGTACATTCCCATAGTCTCAGACCCCAAGAGCTTCTTCTCCATTCCCAAAACCAGAAAAACTCTAACTTTTGCCTATGCTTTTACTTTTGCCTTTGTTGCTTTCACTGTTTTCCTTGCCTTTTGTCCCTCTCCCAACACCTCTTCTCCCTTCTTCACCAACATATTCTCCTCCACTGCTTCCTCCACTTCCTCCACTACTGCTTACAAGTCACAACTTTCTTCCATTTTCTCTTTCCTCTTCAACACCACCACTTCTTCCTCTTCTTCTTCTTCTTCTTCCGATTCCACCCATGCCACCACCACTTCTAGATCTACCAACACCACTTTTCAATCTCCTCCCACAACTCAAAAGCCTTTTAAAGCAACCCCTTTTCAAAACCACACTCAAACAACCCCATCTATAAGCAAGATACCCACCAATCAAACGGAAAAACCGCGTGATCGTGTTGTGAATAAAGAGCCATCAAGTGCATCCAATCATACCCAACTTTCTGGAACTTCTTATGAGGATAAAGCTTTAAACAAGTCAAATCATTCTTCGAATGGTGTTGCTTCTTTGCCCAAGGTTTCAGGGGGAAGTCCCCGTGAGAATTTGAGTTCTCCTGTGAAAGGAGAGGGAGTTGTGCATGGTAATTACACGGCTTCCCTGGTGAAGAAACAGAAGGATGGGAACAAGGAAACGGATTCGGGGATGGAGGATGAAAAGATTGAGGCTTTGGTCAAGTGTGATTTTTTTGATGGGGAATGGATTAAGGATGATTCTTATCCTCTCTATGAACCGGGGTCTTGCAATCTGATCGATGAACAGTTCAGTTGTATCCAAAATGGAAGACCTGATAAAGACTATCAGAAATATAAATGGAAGCCAAAGGGATGCAGCCTCCCAAGGTTGGACGGACATAGAATGCTGGAAATGTTGAGAGGCAAGAGGCTTATTTTTGTTGGTGATTCCCTCAATAGGAATATGTGGGAATCTCTCATTTGCATCCTTAGAAACTCTGTGGAAGACAAAAGCAAAGTCTATGAAGCAAACGGAAGAGTCCGTTTCAAAGGAGAAGCTTCTTATTCATTCATATTCAAAGATTATAACTTCTCCGCAGAGCTTTTTGTGTCCCCATTCTTAGTTCAAGAATGGCAAGTTCAAGTAAAGAATGGAACAAAGAAGGAAACACTTCGTCTGGATTTGGTTGGTAAATCTTCAGTTCAATATAAAAATGCAGATATAATCATCTTCAACACTGGTCACTGGTGGACTCATGACAAAACTTCCAAAGGGAAGGACTATTACCAAGAAGGAAGCCATGTATACAATGAACTGAATGTTCTGGAGGCATTTCGAAGGGCAATAACCACTTGGAGTAGATGGATTGATGCCAACATAGATTCATCCAAGTCTATGATATTCTTCAGAGGCTATTCTGCTTCACATTTCAGTGGGGGGCAATGGAATTCTGGTGGACAATGTGACAGTGAAATTGTGCCAATCAAGAATGAGAAGTACTTGAAGGAATACCCTCCTAAGATGAGGGTATTGGAAAAGGTTTTGAAGTATATGAAAACCAAAGTGACCTACCTAAATGTCACTAAAATGACAGATTTCAGGAAGGACGGTCATCCCTCTATTTATAGGAAGCAAAACCTATCAGCAGAGGAGAGAAAATCACCATTGAGTTTCCAAGACTGCAGTCACTGGTGCCTCCCTGGTGTTCCTGATGCATGGAATGAGATCCTTTATGCTGAGCTTCTTTTGAGACAGTATCAGAATAAGCATCTGAAGAACAGAACATAG 1806 0.4181 MADATKYIPIVSDPKSFFSIPKTRKTLTFAYAFTFAFVAFTVFLAFCPSPNTSSPFFTNIFSSTASSTSSTTAYKSQLSSIFSFLFNTTTSSSSSSSSSDSTHATTTSRSTNTTFQSPPTTQKPFKATPFQNHTQTTPSISKIPTNQTEKPRDRVVNKEPSSASNHTQLSGTSYEDKALNKSNHSSNGVASLPKVSGGSPRENLSSPVKGEGVVHGNYTASLVKKQKDGNKETDSGMEDEKIEALVKCDFFDGEWIKDDSYPLYEPGSCNLIDEQFSCIQNGRPDKDYQKYKWKPKGCSLPRLDGHRMLEMLRGKRLIFVGDSLNRNMWESLICILRNSVEDKSKVYEANGRVRFKGEASYSFIFKDYNFSAELFVSPFLVQEWQVQVKNGTKKETLRLDLVGKSSVQYKNADIIIFNTGHWWTHDKTSKGKDYYQEGSHVYNELNVLEAFRRAITTWSRWIDANIDSSKSMIFFRGYSASHFSGGQWNSGGQCDSEIVPIKNEKYLKEYPPKMRVLEKVLKYMKTKVTYLNVTKMTDFRKDGHPSIYRKQNLSAEERKSPLSFQDCSHWCLPGVPDAWNEILYAELLLRQYQNKHLKNRT* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0222 601 MobiDBLite consensus disorder prediction 160 203 - -
Vra8g0222 601 MobiDBLite consensus disorder prediction 91 146 - -
Vra8g0222 601 Pfam PMR5 N terminal Domain 247 298 IPR025846 -
Vra8g0222 601 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 300 585 IPR026057 GO:0016740
Vra8g0222 601 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 15 594 - -
Vra8g0222 601 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 15 594 IPR029962 GO:0016413
Vra8g0222 601 MobiDBLite consensus disorder prediction 91 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0222 Vra-Chr8 2687203 2690782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0222 - - var:108324899 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0222 8 2687203 2690782 Vra8g0222 8 2687203 2690782 ECH
Vra3g0039 3 397433 400428 Vra8g0222 8 2687203 2690782 PCT