Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0039 ATGGCTGATGCCACCAAGTATGTTCCCATCGGTGGTGCCAACCTCTCCTCCGACCTCAAGAGCCTCTCCGCAATTCTCAAAACCAGAAAAACAGTAGCTTTTGCATACGCTTTCGTAATTGCCTTCGTGGCTTTCACTGTTTTCTTAGCCTTTTCTCCTTCTCCAAACGCTTCCTCTCCCTGGTTCACCAACATATTCTCTTCCACATCGTCCCCAGATGGTTCCTACAAACCTCAAATCCCTTCCATTTTCTCACTCCTTTTCCCAAACTCTTCTTCACCCTCTAATTCCTCTGATCCACTGCTCAACAACACCAACACTTCTAGATCTGCAAATATTAATGCCACTTCTCTTTCTCCTCATCTCAACACTACCTCACAAACTCAAACTCTCAAAGCAACCTCCTTTTTAAACCGAACACAATCCTCGGCTGTTTCATCCCAAGGTCCGGTTCCTTTCCCAACCGCAAACCAGACCACGAATTCTCACGCTCCAAGTCTGGAGGTGAAATCTCCACCACCCCTTGTCGCTGAGGAAACATCTGGTGGTGGAAAAAATCACACTTTTAACACCCCTGAAGCTAAAGCTATTACCACTAACCAAACTACAAATGCTACTGCACCTGCAACACCTGCAACACCTGCAACCAATGTTTCAATTAGTTTCCCTTTCCAGAAAGTTCCACATCAGAACTCAAGTTCTAATTCTTCTGTGAAGGCTGATTCGGTAAAGGGTGTTGCTTCGAATGGTAATTACACGGCTTCTCTGGCGAGGAAACGGATTAATGGGAATAATCACACTGAGGGGAACGATGAATCGATGGAGTCTCTCATGAAGTGTGATTTTTTTGATGGAAAGTGGGTTAAGGATGATTCTTACCCTCTCTATAAGCCAGATTCTTGCTCTTTGATAGATGAGCAGTTCAATTGTATTAGGAATGGAAGGCCCGATAAGGAATATCAAACGTATAAGTGGAAGCCTAAGGGTTGCAGTCTCCCAAGGTTGGATGCGCATCGAATGCTGGAATTGTTGAGAGGCAAGAGACTTGTTTTTGTTGGCGATTCGCTCAATAGGAACATGTGGGAGTCTCTGATTTGCATATTGAAAAGTGCCGTGAAGGATAAAAAAAAGGTTTACGAAGCAAATGGAAGAGTTCATTTCAGAGGCGAAGCCTTTTATTCATTTATATTCAAAGATTATCACTTCTCTGTGGAGCTTTTTGTGTCTCCATTTTTGGTTCAAGAAGGAGAAATGACTGATAAGAATGGAACAAAGAAGGAAACACTCCGTCTTGATTTAGTTGGTCAATCTTCGTCCCAATATAAAGATGCAGATATTATCATCTTCAACACTGGCCACTGGTGGACTCATGATAAAACCTCTAAAGGACAGGACTATTACCAAGAAGGCAACCATGTGTACTCTGAGTTAAACGTTCTTGAGGCATTCCGAAGAGCTTTAACTACATGGAGCAAGTGGGTTGATGCCAACATTAATCCATCCAAAACCGTGGTCTTCTTCAGAGGTTATTCTGCTTCCCATTTCAGTGGTGGACAGTGGAATTCTGGTGGGCAATGTGACAGTGAAACTGATCCAATTGAGAACGAGAAGTACCTAACTGAGTATCCAGATAAGATGATTGTTTTGGAGAAGGTGCTAAAGAACATGAAAACCCGTGTGACGTACCAAAATGTGACTAGAATGACAGATTTTCGAAAGGATGGTCATCCTTCAATATACAGGAAGCAAAATCTAACTCCTGAAGAAAGAAAATCGCCATTGAGATACCAAGATTGCAGCCACTGGTGCCTTCCTGGTGTTCCTGATATATGGAATGAGATTCTGTATGCCGAACTTCTAATGAGAGAGTATCGGAATCAGCATAAGCAGAAGAGAACATAG 1902 0.4285 MADATKYVPIGGANLSSDLKSLSAILKTRKTVAFAYAFVIAFVAFTVFLAFSPSPNASSPWFTNIFSSTSSPDGSYKPQIPSIFSLLFPNSSSPSNSSDPLLNNTNTSRSANINATSLSPHLNTTSQTQTLKATSFLNRTQSSAVSSQGPVPFPTANQTTNSHAPSLEVKSPPPLVAEETSGGGKNHTFNTPEAKAITTNQTTNATAPATPATPATNVSISFPFQKVPHQNSSSNSSVKADSVKGVASNGNYTASLARKRINGNNHTEGNDESMESLMKCDFFDGKWVKDDSYPLYKPDSCSLIDEQFNCIRNGRPDKEYQTYKWKPKGCSLPRLDAHRMLELLRGKRLVFVGDSLNRNMWESLICILKSAVKDKKKVYEANGRVHFRGEAFYSFIFKDYHFSVELFVSPFLVQEGEMTDKNGTKKETLRLDLVGQSSSQYKDADIIIFNTGHWWTHDKTSKGQDYYQEGNHVYSELNVLEAFRRALTTWSKWVDANINPSKTVVFFRGYSASHFSGGQWNSGGQCDSETDPIENEKYLTEYPDKMIVLEKVLKNMKTRVTYQNVTRMTDFRKDGHPSIYRKQNLTPEERKSPLRYQDCSHWCLPGVPDIWNEILYAELLMREYRNQHKQKRT* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0039 633 MobiDBLite consensus disorder prediction 138 191 - -
Vra3g0039 633 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 332 617 IPR026057 GO:0016740
Vra3g0039 633 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 626 IPR029962 GO:0016413
Vra3g0039 633 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 19 626 - -
Vra3g0039 633 Pfam PMR5 N terminal Domain 279 330 IPR025846 -
Vra3g0039 633 MobiDBLite consensus disorder prediction 95 126 - -
Vra3g0039 633 MobiDBLite consensus disorder prediction 138 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0039 Vra-Chr3 397433 400428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0039 - - gmx:100811425 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0039 3 397433 400428 Vra3g0039 3 397433 400428 ECH
Vra3g0039 3 397433 400428 Vra8g0222 8 2687203 2690782 PCT