Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0221 ATGGCGAAGTTCGGCGAGGGTGATAAACGTTGGATCGTGGCGGACCGTGCTGACGGCACCAACGTTCACAACTGGCACTGGGCTGAGACCAACTGTCTCGAATGGTCCAGAACCTTCTTCCGAAAGCTTTTCGCCAACGTCGTCGTCGCTGACGGTGACGTCTCCGTCACCGTCAAGAAGGTGGAAAAACTCGACGGTGAGGCCTACGTTAACGTGCGCAAGGGGAAGGTGATTCCCGGTTACGAGATCGGCGTTACACTCGCTTTGGAGAGTGAGGTGCGTGGCTCCAACGGGAAGCTCCTGCAGAAGGTCGATGGCGCCGTCGAGATCCCGTACATCTCCGATGAGAACGCTGGCGAGGATCCCGAGGTTAGGGTTACGGTGAAGGATAGCGGAGAGGTTGGGAAGAGGTTGAAGCAGGTGGTGGTGGAGAAGGTGAAACCGGTGATTTTGGAGAAGGTTAGGGTTTGGGTGGAGAGCATGGCGAAGGGTGGGCCAGTGAAGGATGACCTTGAAGCGAAGAAAGTGGTGTCACAGAAGAACACTAGTAGTATTAATAGTAATGGTAATGTTAATATTAATGGTAATAATGGGAACGATTCGAAGAAGAATGAGAAGAGTGAAGGGAAGAAGGGGTTTAAAACGATCAATTTGACAGAGAGGTTTAATTGTAGGGCGAAGGATTTGTTTGAGATTTTGATGGATGAGAATAGATGGAGAGGTTTCACACATAGCAATGCGAAGATTAGCAAGGAGGTTGGGGGTGAGTTTTGTATTTTCGATGGGTCTGTGACTGGGGTAAACTTGGAGTTGCAGGAAGGGAAGTTGATCGTGCAGAGGTGGAGGTTTGGGAGCTGGCTTGATGGGATTCAATCCACGGTCAGGATTGTGTTTGAGGAGCCTGATAGTGGAGTTACAGTTGTTAAGCTCACGCATAGTGATGTGCCTGAAGAAGACAGATATGGCAATGCGACTGTGGTGGAAAACACAGAGAGGGGATGGCGGGATCTCATTTTCCAAAGGATAAGGGCTATGTTTAGTTTTGGAATTTGA 1053 0.4976 MAKFGEGDKRWIVADRADGTNVHNWHWAETNCLEWSRTFFRKLFANVVVADGDVSVTVKKVEKLDGEAYVNVRKGKVIPGYEIGVTLALESEVRGSNGKLLQKVDGAVEIPYISDENAGEDPEVRVTVKDSGEVGKRLKQVVVEKVKPVILEKVRVWVESMAKGGPVKDDLEAKKVVSQKNTSSINSNGNVNINGNNGNDSKKNEKSEGKKGFKTINLTERFNCRAKDLFEILMDENRWRGFTHSNAKISKEVGGEFCIFDGSVTGVNLELQEGKLIVQRWRFGSWLDGIQSTVRIVFEEPDSGVTVVKLTHSDVPEEDRYGNATVVENTERGWRDLIFQRIRAMFSFGI* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0221 350 Gene3D - 18 174 IPR036338 -
Vra8g0221 350 MobiDBLite consensus disorder prediction 178 200 - -
Vra8g0221 350 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 350 - -
Vra8g0221 350 MobiDBLite consensus disorder prediction 178 210 - -
Vra8g0221 350 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 163 IPR036338 -
Vra8g0221 350 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 350 IPR039981 GO:0001671|GO:0051879
Vra8g0221 350 SMART Aha1_N_2 29 163 IPR015310 GO:0001671|GO:0051087
Vra8g0221 350 SUPERFAMILY Bet v1-like 215 349 - -
Vra8g0221 350 CDD SRPBCC_Aha1 215 348 - -
Vra8g0221 350 Pfam Activator of Hsp90 ATPase homolog 1-like protein 226 345 IPR013538 -
Vra8g0221 350 Pfam Activator of Hsp90 ATPase, N-terminal 29 163 IPR015310 GO:0001671|GO:0051087
Vra8g0221 350 Gene3D - 213 349 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0221 Vra-Chr8 2676460 2679075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0221 - - gmx:100775568 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0221 8 2676460 2679075 Vra8g0221 8 2676460 2679075 ECH
Vra3g0041 3 418271 419976 Vra8g0221 8 2676460 2679075 PCT