Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0174 ATGGCTTCGGAAGTAGTTCCATCTTCCAGGGATTTATTGAAATGTTGCAATTGTGGGTGTGGTTGCTCGACGTTAGCTCAATCTTCGGGGGTTTGGATTCGATCTGTTAAACGAAAGCATGATGAGTTCAAAATGGATGGTCAACTGGCCATGCCGGCGTTTGCAAAGGTCGAAATTGAGAATGAATGTGTGGCCTTGCGTGAGATGGTCAGTATGCAGCAGAAAACCATTCAAGATTTGAATGCTGAGTTGGAGGAGGAGAGAAATTCTTCATCAACTGCGGCTAATGAGGCCATGTCAATGATATTGAGGCTGCAGAGGGAAAAGGCAGAGGTTCAAATGGAGGCGCGCCAATTCAAGCGATTTTCGGAGGAGAAGATGCAACATGACCAGGAGGAACTTCTATCTTTGGAAGATTTATTGTACAAGAGGGAACAGATCATTCAGTCACTTACTTGTGAAGTTCAGGCTTACAAGCACAGGTTGATGAGTTTTGGTCTTACCGAGGAGGAGGCCGAGGGTGACCAATATGAACTTCCACCCTATGAATATCCTCCTTTGAAATGTAGTGTGGTGCATGGTGCTACAGATGCTGATATCGATGACACGGATATAGAGAAATATGCTTTTGGTGAAACTCCAACTGTCCAATTGAGGAGCTTGGAAAATAGGATTTCTCAAATGGAGAAAACTCCCACTTATACCCAGATGGATGGGGATTTTACAGTGAAAAATAGTCTAGAGAAAGTAATTGTTGGACAGTCTCCAAGAAGGAATAAGCATTCTAGGAAACTTTCCTCTGACTCAACATCAATTGGTGGGATGGTTAAAGAAACAGGACCCGAGTCTACCATGGATTCTCCCAAGCGCAATAATAACAATAAGAGAGATTATTTCTCGAAGTCAGAGGAAGCTTCCAAGGTAGATAATGTATCAGAAGGTGATGATACGAATGACAGAATTTATACAATTGACTCTGTTCATAGTGGCGCACCATATAATGGTTTCACAGATTCTAAAGCTGAAACTATTGATTACGAAGATTATGCAACCACTCCAATGGGGTCAGGGAATCATGCTACTGAATTTGAGGATCCCTACGTAAAGAAGCTTTACATGAGGCTGCAGGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACGGATAAAGCACAACTTGTGTTGCTGAAGGAAATAGCTCAACATCTGTGCAAAGAGATGTCACCGCAAAGAAAAATGGCAAAAAAACCTAGTTTTGCAGGCAACTCTGCATTATTTTCAATTGTTAAGTGGGTTTCTTCAGTTGTTTTCTGGAGAAAGAGAGCTCATCAAAGCAAGTATATGTTTGGTCTACCGCCTGAAAGTGTTGGCTTGCTGATGCTCCTAGACAAGGGAACACGAGCAAGACCATGGAGATGCGTTTCAAGTACACAAGTGGGCGATTAA 1464 0.4276 MASEVVPSSRDLLKCCNCGCGCSTLAQSSGVWIRSVKRKHDEFKMDGQLAMPAFAKVEIENECVALREMVSMQQKTIQDLNAELEEERNSSSTAANEAMSMILRLQREKAEVQMEARQFKRFSEEKMQHDQEELLSLEDLLYKREQIIQSLTCEVQAYKHRLMSFGLTEEEAEGDQYELPPYEYPPLKCSVVHGATDADIDDTDIEKYAFGETPTVQLRSLENRISQMEKTPTYTQMDGDFTVKNSLEKVIVGQSPRRNKHSRKLSSDSTSIGGMVKETGPESTMDSPKRNNNNKRDYFSKSEEASKVDNVSEGDDTNDRIYTIDSVHSGAPYNGFTDSKAETIDYEDYATTPMGSGNHATEFEDPYVKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQHLCKEMSPQRKMAKKPSFAGNSALFSIVKWVSSVVFWRKRAHQSKYMFGLPPESVGLLMLLDKGTRARPWRCVSSTQVGD* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0174 487 Coils Coil 368 395 - -
Vra8g0174 487 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
Vra8g0174 487 PANTHER BNAANNG28530D PROTEIN 8 462 - -
Vra8g0174 487 Coils Coil 70 125 - -
Vra8g0174 487 MobiDBLite consensus disorder prediction 252 318 - -
Vra8g0174 487 Pfam Zein-binding 65 155 IPR007656 -
Vra8g0174 487 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 8 462 - -
Vra8g0174 487 MobiDBLite consensus disorder prediction 289 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0174 Vra-Chr8 2030487 2035578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0174 - - gmx:100806435 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0174 8 2030487 2035578 Vra8g0174 8 2030487 2035578 ECH
Vra3g0631 3 6886367 6889799 Vra8g0174 8 2030487 2035578 PCT