Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0161 ATGGAATCTGACAATGGAGTTGCTATGGAGGACGAGAAACATGTTATTGGGGAAACAACTAATGAGAACATAAACAAGGAATCTGAAAACAGTTGCAATGCTGAAATTCAGACCAAGAATGAGGCATCTGAATCCACTGTAAAAGTTGAAGGGCTCAAATCTACAGCAAGTAGAAACTCAAAACTTGCCAAGGAACATGGTGGCAAAGGTGATGTTGCTTCAAAGAAGAACAAATCTGTCACCAAAGACAAACCCAATTTGAAGTCCAAAACTTCACCTCAAACACACAGGCCAAACCTCTCCAAGAGCCTTTCTTTCCCAGCCAAATCAGCTGCTAGAGATGTCATGAAGAAAAGCATTAATGGAAATCTTGTGAAGACAGAAACTAAGCATGTTAATGGGGCCAGAGCTCAGCCTTCTATTCGTCGTTCAAGCAGGCTGACAAACAATGAAGTTAACTCAAAGGAGTCTGATAAAAACACTGGAAATTCAAACCATAAGACCTCTTTAACATCCATGACTAGCCCTAAAAGCTCTGAGATTGGAGAGTCTTCTCCAGTGGTGAATGTGGTTTCCAAGAACCTTACATCTGAGGCATCCTTACCTGTTGATCAGATTTCAACCCCAGCAAAAACTGAAAAACCAAATAAAGAGGACGATGATGCTCACTCCACAACTTCAAGTCATACTCCTCGAAGGAGAAGCAGTGGTTCTGGATTTTCCTTCAGATTGGAAGAAAGAGCAGAAAAGAGGAAGGAGTTCTTCTCAAAGTTAGAAGAGAAAATTCAGGAAAAGGAAGCAGAGAAAACTAATCAGCAAGAGAAATCAAAGGAAAACCAGGAGGCTGAGATCAAGCAATTGAGGAAGACTATGACATTCAAAGCCACTCCAATGCCAAGTTTCTACAAGGAACCTCCTCCAAAAGTTGAATTGAAGAAGATACCTATAACACGCCCAAAATCTCCTAAGCTTGGAAGGAACAAAGGATATGTTGTGAACCATTCAGATGATAAATCTTGCTCTACTCCTCATGCAAAACAGCAACAAAATGATTCAACCAAGGCAAAGGTAAAGGGTACTAATAAAGAAGTGATTTCAAAGAAACCAATCAGAAAAACTCAAGCCAAGCTGCAGTCTCAGGAAACTGCAATTGGAAAAACTGAGAATAATTCTGTGAAGCCTACTAAAATCAACCAAGATGTCAAAGCAGGCACAGGAAACAATAAAGAATGCCATGATCCTCCAGTTTGCAATTCTGAATATCAAGATGACATGGAGCTAGAATCCAAAACTGAGCTTACTCAGAATGATGCACTGGTCTTAAATTCATCCACACCCGAGATTGTATCATACGAGGTTACTGTGGGAGTGTAG 1374 0.4039 MESDNGVAMEDEKHVIGETTNENINKESENSCNAEIQTKNEASESTVKVEGLKSTASRNSKLAKEHGGKGDVASKKNKSVTKDKPNLKSKTSPQTHRPNLSKSLSFPAKSAARDVMKKSINGNLVKTETKHVNGARAQPSIRRSSRLTNNEVNSKESDKNTGNSNHKTSLTSMTSPKSSEIGESSPVVNVVSKNLTSEASLPVDQISTPAKTEKPNKEDDDAHSTTSSHTPRRRSSGSGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKTNQQEKSKENQEAEIKQLRKTMTFKATPMPSFYKEPPPKVELKKIPITRPKSPKLGRNKGYVVNHSDDKSCSTPHAKQQQNDSTKAKVKGTNKEVISKKPIRKTQAKLQSQETAIGKTENNSVKPTKINQDVKAGTGNNKECHDPPVCNSEYQDDMELESKTELTQNDALVLNSSTPEIVSYEVTVGV* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0161 457 MobiDBLite consensus disorder prediction 1 20 - -
Vra8g0161 457 Pfam Targeting protein for Xklp2 (TPX2) domain 240 308 IPR027329 -
Vra8g0161 457 MobiDBLite consensus disorder prediction 211 228 - -
Vra8g0161 457 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 457 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 21 58 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 59 85 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 334 355 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 86 106 - -
Vra8g0161 457 Coils Coil 370 390 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 138 210 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 263 417 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 356 370 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 372 405 - -
Vra8g0161 457 MobiDBLite consensus disorder prediction 1 245 - -
Vra8g0161 457 PANTHER PROTEIN WVD2-LIKE 4 1 457 IPR044833 GO:0008017
Vra8g0161 457 MobiDBLite consensus disorder prediction 263 288 - -
Vra8g0161 457 Coils Coil 248 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0161 Vra-Chr8 1897144 1900979 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0161 - - gmx:100798810 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0623 3 6821359 6823606 Vra8g0161 8 1897144 1900979 PCT