Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0623 ATGGAATCTGATTACGGGCTTGCTGTGGAGGAAGAGAAACGTGTCATCGGAGTAACAACCAAGGTGGACAATATAAAGAAAGAAGATGAAGAAATTCAGACCATTTCTGCTGCAAATAAAAATTCAAAAGGTGTCACTAAGGAAACTGGTGGGAGAGCAAGTGTTGCTTCCAAGAGCAACAAATATGCCAAATATCATTTGAAGGGTCTGAGTTCAATACCTCAAAAACAAAGGCCTTCACTTTCCCAAAGCATTTCTTTCCCACCCAGATCATCTCGAGAAGATGCTATGCACAAAAACATTGATGGCTATATTCTGAAGACAAACGTTCGTCATTTAAACAACTCCACAAACTCACTGGCTTTGAAACGCTCTGCGTTTGGAAGGACTACTACAGTTACTCCAGCCACCAAGAGCCAAGTTTCTGAGACATCTTTACTTGTTGATCATGTGTCAAACAGGGCAAAGTCTGGAAAACCAAATAAAGATGATGATGATTGCCATTCCGCGACTTCAAGTGCTACTCCTCGTCTGAGAAGCAGTGGAGTTGGATTTTCCTTTCGATTGGAAGAAAGAGCTGAAAAGCGAAAGGAGTTTTTCTCAAAGTTGGAGGAAAAAACTCTAGCCAAGGAAGCAGAGAAAACTAACCTACAAGCAAAATCAAAGGAAAACCAAGAGGCAGAGATCAAACTATTGAGGAAGAGCCTGACATTCAAAGCCACTCCAATGCCAAATTTCTACAAGGAACCACCTCCAAAAGTTGAGCTTAAGAAGATACCAACAACACGCCCAAAATCCCCAAAGCTTGGAAGGCACAAGGAACCTACAATGAACAACAATTCAGTAGAAGATAAGTGTAGCTCAAGTCCGCGTGGGAAACAACAGCAGAATGACTCAAACAAGGGTAAGGGTCATAAGGATGTGATTTCAAAGAAACAAATCCCAAAAAACCACTCCAAGCTGAAGTCTGAGGAAAATGTAACCATAGAAAACAAAGAATTCCAAGTTCCAGATAACAACAATTCTGAATGCAAAAATGACATGGAGTTACAACAATGTGAACCAGGTCATGCATCAAATACTGCACTGCTTCTAAATTCTACTACGACGGAGCTTTTGTCGTATGAGGTTATTGTTGGAGTGTAG 1146 0.4092 MESDYGLAVEEEKRVIGVTTKVDNIKKEDEEIQTISAANKNSKGVTKETGGRASVASKSNKYAKYHLKGLSSIPQKQRPSLSQSISFPPRSSREDAMHKNIDGYILKTNVRHLNNSTNSLALKRSAFGRTTTVTPATKSQVSETSLLVDHVSNRAKSGKPNKDDDDCHSATSSATPRLRSSGVGFSFRLEERAEKRKEFFSKLEEKTLAKEAEKTNLQAKSKENQEAEIKLLRKSLTFKATPMPNFYKEPPPKVELKKIPTTRPKSPKLGRHKEPTMNNNSVEDKCSSSPRGKQQQNDSNKGKGHKDVISKKQIPKNHSKLKSEENVTIENKEFQVPDNNNSECKNDMELQQCEPGHASNTALLLNSTTTELLSYEVIVGV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0623 381 MobiDBLite consensus disorder prediction 71 95 - -
Vra3g0623 381 MobiDBLite consensus disorder prediction 251 272 - -
Vra3g0623 381 MobiDBLite consensus disorder prediction 152 180 - -
Vra3g0623 381 Coils Coil 210 230 - -
Vra3g0623 381 Pfam Targeting protein for Xklp2 (TPX2) domain 185 254 IPR027329 -
Vra3g0623 381 MobiDBLite consensus disorder prediction 242 324 - -
Vra3g0623 381 PANTHER PROTEIN WVD2-LIKE 4 36 115 IPR044833 GO:0008017
Vra3g0623 381 PANTHER PROTEIN WVD2-LIKE 4 120 330 IPR044833 GO:0008017
Vra3g0623 381 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 120 330 - -
Vra3g0623 381 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 36 115 - -
Vra3g0623 381 MobiDBLite consensus disorder prediction 298 324 - -
Vra3g0623 381 MobiDBLite consensus disorder prediction 73 90 - -
Vra3g0623 381 MobiDBLite consensus disorder prediction 155 170 - -
Vra3g0623 381 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0623 Vra-Chr3 6821359 6823606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0623 - - vun:114179125 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0623 3 6821359 6823606 Vra8g0161 8 1897144 1900979 PCT