Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0159 ATGGAGAAGAAAAGGAAGATTGTGCAGTATAGGGAGAGACTGGACAGGACCCTTGCTTCACCTGATCTTACAAATGATGGCTTGCTCAAAAAGCTTGTCAGAAGTCAACTTTTGCTTTCTTCAGAACCTGAAGTAGAAGGATATATAGATCAATTAGCAGAAGCCAAGACTGCCGAGGTATCTCATTTTCTCGATATGTTGAGGAGTGTTTCATCAGATGACAGTGAAAGATCTAATACGTCACACACTGATTGGAAATTAAAACAAGATGGTGAAGAGTTTCGGGTTATGTATCGCGAAGGACCAGAAGGGACCCCTTTTCATACAATGCTTGTGGAAGGCTTTGTAGATGGGCCTGTTGATGTTTGTTTATGTATCTCATGGGAGACATCCCTTTACAAAAAATGGTGGCCTCAGTCTACTGTTCCCACTTTCAAAATCTTATCAACTGAATGCTTGCAGAAGGTTGGGATTGGGGAGCAGTTATCACTCGTGAGGATGAAGGTTTCATGGCCTCTGTCTACGAGGGAAGCTATAGTGCACTATTATTTGTTTGAGTATTTTCAAGATGACTTAATTGTTGTTCTTACAAACTCGGTTTCTGACTCGAAGAATGCCACGGAGACCCTTTATGGCTTCAACAATGAAGTAATTCCTGAAGCAAAGGATGTTGTGAGAATTGATTTGGTGGGAGGCTTTGCTTTGCAAAAGGTGACATCAGAAAGAAGTTATTTTCGGACAATAGCAAATATGGATGTAAAGCTGGATTTTGTGCCACCATCCCTTATAAACTTTATTTCAAGGCAGCTCATTGGCAATGGTTTCAGACTTTTTCAGAAGGCTGTGTCTTCTATGACGAACCACGGTAAAGGAGAATTCAGCAAGGCCTTAGGGGATCCATTATATGTTAGAATTCGTGAAGCTCTATACAACACTAGTGTATCAAAGGCCATGAATGGTGGAGAGCTTCAGCAAGTTGCAACAGCTAAAGACCTTGTTGAAATCAAGCATGAAGAGGAAAAAGATGCATCCATGGAAGATATGAGTAACCAATATGCAAATAATGTCCTGCCAATGACAACGAATACCGAAGAACTAAGTAGTAGCAAAACATTTGGTGAGATTGTAGTAGATACTGAAGAAATTGTAGAAATTGAGGAGGGCAATAGAGAAGTAGAAGACATTCCAATGAAGGAAGTTAACAAAAGTGTAATAAGAGGCAAGAGGAGTGTATATATCAGATCAGAGGTAGAACATGCACTGCAAACATTAGACAAGGCCATTTCAATGGTTCGTCAACAGAGATTGACCACTTGTATAAAAAATGATGATAGAGAGGATTCATATTCCTTAAAACTCACTCAAATAAGCTCCAAAACTCATGTTGGAGCTGAAGTACCAAAGGGAGATACTCCAGAGAGAGCTTTGCAACTAGGGCCTGACACTAACTCTGGTATCCAAAACTCAAGATATACAGGAACAAATCCTAACTTGAAGGAAGTAAATTCTAACAAAGTAGTACCAACTTCATCGGAGCAGAATCTTCCAACAGCTATTTTGTCAAGCCAAGCTGTTTCATACCCTATGGGAAATGGTGCAATTCAGCATCAAACACCAACCAGCAACAAGCTATTGAACACTGATTCAGTTGAAGATGTTCCTTCAGATCATGCAGAAAAAGCAAGCAAGCAGAAAAAAGTAAACACCATTGCAACTCATGGTATGAATTCAGAGGTACCAAAGAAGTTATGCAGAAAGAAAAAATTTTGGCATTTGTTTTCTGCATTAACTAAAAGGAAAAAAGAGTTAAATGGGAAAGAGCAGAAGAAGAAAACAGGGTACTTTTAG 1848 0.3945 MEKKRKIVQYRERLDRTLASPDLTNDGLLKKLVRSQLLLSSEPEVEGYIDQLAEAKTAEVSHFLDMLRSVSSDDSERSNTSHTDWKLKQDGEEFRVMYREGPEGTPFHTMLVEGFVDGPVDVCLCISWETSLYKKWWPQSTVPTFKILSTECLQKVGIGEQLSLVRMKVSWPLSTREAIVHYYLFEYFQDDLIVVLTNSVSDSKNATETLYGFNNEVIPEAKDVVRIDLVGGFALQKVTSERSYFRTIANMDVKLDFVPPSLINFISRQLIGNGFRLFQKAVSSMTNHGKGEFSKALGDPLYVRIREALYNTSVSKAMNGGELQQVATAKDLVEIKHEEEKDASMEDMSNQYANNVLPMTTNTEELSSSKTFGEIVVDTEEIVEIEEGNREVEDIPMKEVNKSVIRGKRSVYIRSEVEHALQTLDKAISMVRQQRLTTCIKNDDREDSYSLKLTQISSKTHVGAEVPKGDTPERALQLGPDTNSGIQNSRYTGTNPNLKEVNSNKVVPTSSEQNLPTAILSSQAVSYPMGNGAIQHQTPTSNKLLNTDSVEDVPSDHAEKASKQKKVNTIATHGMNSEVPKKLCRKKKFWHLFSALTKRKKELNGKEQKKKTGYF* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0159 615 Gene3D - 83 288 IPR023393 -
Vra8g0159 615 MobiDBLite consensus disorder prediction 532 565 - -
Vra8g0159 615 MobiDBLite consensus disorder prediction 532 549 - -
Vra8g0159 615 PANTHER START-2 DOMAIN PROTEIN 1 354 - -
Vra8g0159 615 PANTHER START-2 DOMAIN PROTEIN 373 568 - -
Vra8g0159 615 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 354 - -
Vra8g0159 615 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 373 568 - -
Vra8g0159 615 SUPERFAMILY Bet v1-like 80 282 - -
Vra8g0159 615 MobiDBLite consensus disorder prediction 477 501 - -
Vra8g0159 615 MobiDBLite consensus disorder prediction 550 565 - -
Vra8g0159 615 MobiDBLite consensus disorder prediction 462 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0159 Vra-Chr8 1858263 1863559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0159 - - gmx:100798284 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0621 3 6802177 6811874 Vra8g0159 8 1858263 1863559 PCT