Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0621 ATGGTGAAAAAAGGAAACATTGTGCAGTACAGGGAGAGGTTGGACAAGAGCCTCGCCTTACCTGATCTGACAGATGAACAGATACTCAAAACCCTTGTCAAAAGTCAACTCCAACGTTCTTGTTCAAAAGTGGAAATTGAAGGATGTAATGAGAAATTAGTAGAAACCAAAACCAAGGAGATATATGACTTTCTTAGTATGTTGAGAAGTGCTTCTGGAGACAATAGTGCAGGATCTAGTACATCACGCTCTGATTGGAAATTAAAACAGGATACTGAAGATTTTCGAGTTATGTATCGCGAAGGACCAGAGGGAACTCCCTTTCATACATTGCTAGTTGAAGGCTATGTGGATGGGCCTCTAGATCTCTCTTTGTGCCTTTCATGGGAGTCCTTCCTCTACAAGAAATGGTGGCCTCAGTTTACTATTCCCAGTTTCAAAGTTCTAGTATCTGAACGTTTGAAGAGGGTCCAGATTGGAGAACACATCTCACTTGTTAGGATGAAGGTTCCATGGCCCCTATCTACAAGGGAAGCTATAGTGCATTATTATCTTTTTGAGTACTTTCAAGATGACTTAGTAGTTGTTCTTTTGAATACGGTCTCTGAGTCTACGAGCATTGACAATTTCAACATGGATGCAATTCCTGAGGCGAAGGATGTTGTGAGAATTGATTTACTGGGAGGCTATGCTATGCAAAAGGTGACATCAGAAAGAAGTTATTTTCGGATAATAGGAAATTTGGATATAAAGCTGGATTTTGTGCCTCCAACCCTCATAAATTTCATTTCAAGGCAGCTCATCGGCAGTGGTTTCAGACTTTATCAGAAGGCTGTTGCTTCGATGTTGGGCAACCATAAAGATAAAGACATCAGCAAGGCCTTGGAGGATCCATTGTATGTTAGAATACGCGAAGCTTTGGTAATTGGAGAAGAGCTTAAGCAAGATGCAAGCTTTGTTCCAGCTGAAGGACTTATTCAAAGTGAGCAAAATGGGGTAAAAGATAAAGATATATCCTGTGAGTATATGAGCAACCAACGTGCAGGTGGTGAAGAAGATGTAGAAGCAGGTTGTGAAGAGATTGTACGAGTTGAGGAAGATGTTAACAAGGTACTTGAAGTTCCATTTGAGGAAGGTGATTCATTGAGTGTGCTGATCAATGGTGAGATTGAAGCAGATAATGAAGAGATTGAGAAGGAAATGATCAGAGTGAGTGAGATTCCAACTGAGAAAAAGGACTCAGGGAGTGTACTGAAGGATAAGATGAATGGACATGTACGCTCAGATGTGAGAAGGGCTCTAGAAACAATAGAGAGGGTTATTTCAACGGTTAAGGAACATGGATTTCATTCTCGAATGCCTACTTCAAACTCTGCAAAACCTATTCCAGTATGTTTGAAAGAGGAGGATAGTGTCAAAGAATCAAGCAGCAATATACGAGAGGAAACTTCAGAAGAATCTGGGACGATACAAAGCTTAAGGCAGACAGAAATAAATCCAAACTTGAAGGAAGTTAACCATAAGAAAGTAGCACCAGCTTCAGCAGACCATAATCTTTCAAGACCAGTGGAAGTGAACCAGATTGATTCATATTCTTTGAAAAATGGGACAACAGTCCAAGATATAAGTTCAGAGGACATGAAAAAATCAACCAGGGAGATAAGAAGGCAGAACCCAAAACGCAGCGTTCGAAGTCGGAGTCTTGGGGAACAAGTTGCAAAGGCAACCATAAAGAAAGGGAATCTTGGTGCTCAAACTGTAAAGGCGAAAATGGGCTGGGTTTGGAGCGATGACAACAGCGACGATCTTCGACGCGATATCTCGTCGGAAGGGTGCTCCACCACGAGGGTCGTCAAAGCTCAATGCAGAACAGAGGAGGTCGAATCTGGAAAGTTCGTCAGAAAGTGCGAGAAAACAGAAGAGCTTCTCAGGAATTGCATCGGAAAGCCTGTTGAAGTATTGCAATCTAACAAAGAGTATACCGAAGAGGATATAACAGACGAGGTACTTAAAGGAAGGTCTGTTCCATCTAGCTCATCAGACCGTGGTGTGTTTGACTTCCCAGGGCTACGAAATGATATCGAAGTCATGGAACGTAACCTTTTCCATGGTCTTAGTCGTTTCCTGGAATCAGCTGAAGAAATGACGAATGACTTTTTTGATGTTTTTGGTAAGTCTCCAAGGATCTTCGATGCAGAGTCGTCTTCACCCTCTGTGAAGCGAGAGATCCCTATTGCAAGTCGCCCAGAAGCTTATCCTAAAACCCAGCAGAAGGAATCAGGAGATACTGATTATGTTTCAGTCGCTCAAGATGTTTAA 2319 0.4196 MVKKGNIVQYRERLDKSLALPDLTDEQILKTLVKSQLQRSCSKVEIEGCNEKLVETKTKEIYDFLSMLRSASGDNSAGSSTSRSDWKLKQDTEDFRVMYREGPEGTPFHTLLVEGYVDGPLDLSLCLSWESFLYKKWWPQFTIPSFKVLVSERLKRVQIGEHISLVRMKVPWPLSTREAIVHYYLFEYFQDDLVVVLLNTVSESTSIDNFNMDAIPEAKDVVRIDLLGGYAMQKVTSERSYFRIIGNLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVASMLGNHKDKDISKALEDPLYVRIREALVIGEELKQDASFVPAEGLIQSEQNGVKDKDISCEYMSNQRAGGEEDVEAGCEEIVRVEEDVNKVLEVPFEEGDSLSVLINGEIEADNEEIEKEMIRVSEIPTEKKDSGSVLKDKMNGHVRSDVRRALETIERVISTVKEHGFHSRMPTSNSAKPIPVCLKEEDSVKESSSNIREETSEESGTIQSLRQTEINPNLKEVNHKKVAPASADHNLSRPVEVNQIDSYSLKNGTTVQDISSEDMKKSTREIRRQNPKRSVRSRSLGEQVAKATIKKGNLGAQTVKAKMGWVWSDDNSDDLRRDISSEGCSTTRVVKAQCRTEEVESGKFVRKCEKTEELLRNCIGKPVEVLQSNKEYTEEDITDEVLKGRSVPSSSSDRGVFDFPGLRNDIEVMERNLFHGLSRFLESAEEMTNDFFDVFGKSPRIFDAESSSPSVKREIPIASRPEAYPKTQQKESGDTDYVSVAQDV* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0621 772 PANTHER START-2 DOMAIN PROTEIN 393 553 - -
Vra3g0621 772 PANTHER START-2 DOMAIN PROTEIN 1 345 - -
Vra3g0621 772 MobiDBLite consensus disorder prediction 731 772 - -
Vra3g0621 772 MobiDBLite consensus disorder prediction 538 569 - -
Vra3g0621 772 SUPERFAMILY Bet v1-like 81 279 - -
Vra3g0621 772 MobiDBLite consensus disorder prediction 468 523 - -
Vra3g0621 772 MobiDBLite consensus disorder prediction 482 500 - -
Vra3g0621 772 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 345 - -
Vra3g0621 772 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 393 553 - -
Vra3g0621 772 Gene3D - 83 285 IPR023393 -
Vra3g0621 772 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0621 Vra-Chr3 6802177 6811874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0621 - - vra:106756746 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0621 3 6802177 6811874 Vra8g0159 8 1858263 1863559 PCT