Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0072 ATGTCGAGGGGAAGATCTGATGGATCGCAAAAGAAGCGTATAGTTGCTTATGCTTGTGGCGTGGCAATCTTTATCGGATTCTTGTATGTGTACCAAGGATCCATCTTTGGTTCTCAGAAGGTTAGTTCATCTGCACTTGAATATGGAAGCAAGTCATTGAAAAGACTTGGGGTATCATATTTGGGCACAGATGATGCTTCTGATAGCAAGCAAGAGGATTCTTCACCAAGGATTGGGCTGGGAGATGGTGAGGATGATATTATACCGAAGAGTTTCCCTGTTTGTGATGATAGTCATTCGGAGTTGATTCCTTGTCTAGACAGACATCTTATCTATCAATTGAGATTGAAGCTGGATCTTTCTTTGATGGAACATTATGAGAGACACTGTCCTCCTCCAGAGAGGAGATACAATTGTTTGATTCCTCCTCCGGCAGGATATAAGATCCCTATAAAGTGGCCAGAGAGCAGAGATGAGGTATGGAAAGCAAACATACCACACACTCACCTTGCACATGAGAAATCTGACCAGAACTGGATGATCGTAAAAGGTGAAAAGATAGTGTTTCCTGGAGGAGGGACACATTTTCATAAAGGAGCTGACAAGTACATTGCATCAATTGCAAATATGCTCAATTTTTCACAAAATATTCTTAATAATGAAGGAAGACTGCGGACAGTTCTTGATGTTGGATGTGGTGTTGCGAGTTTTGGAGCTTATCTTCTTTCATCTGATATCATTGCAATGTCCTTGGCACCCAATGATGTGCATCAAAATCAAATTCAATTTGCTCTAGAGAGAGGAATTCCTGCATATCTTGGTGTCTTGGGAACCAAGAGACTCCCTTACCCTAGCAGATCTTTTGAGCTTGCACATTGTTCTCGGTGCCGAATCGACTGGCTTCAGAGGGATGGAATACTACTCCTTGAGCTAGACCGATTGCTTAGGCCAGGAGGTTACTTTGCATACTCATCTCCAGAAGCATATGCTCAGGATGAAGAGGATAGAAGGATATGGAGAGAAATGAGTGCCCTTGTGGGACGTATGTGTTGGAGAATTGCTGCCAAGAGGGACCAGACTGTCATCTGGCAAAAACCTATTACAAATGAATGTTATATGGAGAGAGAACCCGGCACTCGCCCTCCTCTTTGCCAGTCTGATGACGACCCAGATGCAATTTGGGGAGTAAATATGGAAGCTTGCATCACACCTTACTCTGACCATGACAACAAAGCCGGGGGTAGTGGATTAGCTCCGTGGCCTATGAGACTGACCTCTCCTCCTCCTAGATTAGCTGACTTTGGCTATTCAAATGAAAAGTTTGAAAAGGATACGGAACTATGGCAAGGAAGAGTTGAAAATTACTGGAATCTGGTGGGTCCTAAAATGTCACCAAAGATGGTGAGGAATGTGATGGACATGAAAGCAAACATGGGTTCATTTGCAGCTGCTCTCAGAGGCAAGGATGTTTGGGTGATGAATGTTGTACCACGTGATGGACCAAACACGCTAAAGATTATATATGACAGAGGCCTCATAGGGTCTATCCATGACTGGTGTGAAGCATATTCAACATACCCCCGGACTTATGATTTACTCCATGCATGGAGTGTGTTTTCTGACATTGATAAGAGAGGGTGCAGTCCAGTGGATCTACTGATTGAGATGGATCGTATATTGAGGCCTACTGGTTTCATCTTCATAAGGGATAAGCAAGCTGTGATTGATTTTGTGAAGAAGTACCTAACAGCATTGCACTGGGAAGAAGTTGCAACTGCAGATGCAGGTTCAGACTCTGACCAAGATGCCAATGAAGTGATTTTGGTTGTCCAGAAGAAATTGTGGCTCACCAGTGAAAGTTTTAGGAATACAGAATAG 1878 0.434 MSRGRSDGSQKKRIVAYACGVAIFIGFLYVYQGSIFGSQKVSSSALEYGSKSLKRLGVSYLGTDDASDSKQEDSSPRIGLGDGEDDIIPKSFPVCDDSHSELIPCLDRHLIYQLRLKLDLSLMEHYERHCPPPERRYNCLIPPPAGYKIPIKWPESRDEVWKANIPHTHLAHEKSDQNWMIVKGEKIVFPGGGTHFHKGADKYIASIANMLNFSQNILNNEGRLRTVLDVGCGVASFGAYLLSSDIIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMSALVGRMCWRIAAKRDQTVIWQKPITNECYMEREPGTRPPLCQSDDDPDAIWGVNMEACITPYSDHDNKAGGSGLAPWPMRLTSPPPRLADFGYSNEKFEKDTELWQGRVENYWNLVGPKMSPKMVRNVMDMKANMGSFAAALRGKDVWVMNVVPRDGPNTLKIIYDRGLIGSIHDWCEAYSTYPRTYDLLHAWSVFSDIDKRGCSPVDLLIEMDRILRPTGFIFIRDKQAVIDFVKKYLTALHWEEVATADAGSDSDQDANEVILVVQKKLWLTSESFRNTE* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0072 625 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 623 IPR004159 GO:0008168
Vra8g0072 625 MobiDBLite consensus disorder prediction 63 83 - -
Vra8g0072 625 MobiDBLite consensus disorder prediction 66 83 - -
Vra8g0072 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 449 586 IPR029063 -
Vra8g0072 625 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 623 - -
Vra8g0072 625 Gene3D Vaccinia Virus protein VP39 213 365 IPR029063 -
Vra8g0072 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 359 IPR029063 -
Vra8g0072 625 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 612 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0072 Vra-Chr8 783234 789629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0072 - - gmx:100806600 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0194 3 2280100 2285473 Vra8g0072 8 783234 789629 PCT