Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0194 ATGGCAAGCATGGCAAGAGGAAGAGCAGATGTAAACTCAAGAAAAAATTTGGTCGTGGCTGTGTTGTTTTTTGTGATTGTTGGTGTTTTCTTCTACTTTTATTCTCAGAGTGGCGATTCATCTATTGTTGAGTATGGGGATAAATCTTTGAGACAATTTGGTTTGAAAGGAGACAGAGATGTGAGCGAATCTTCCTCCACACTTATTGGAGGAGAGGACAGTGCTATACCAAAGACCATTCCAGTCTGTGACGATCGTCTATCAGAGCTTATTCCTTGTCTGGACAGAAACCTCATATACCAAACAAGATTGAAGCTTGATCTAGCTGTGATGGAGCACTATGAAAGACACTGCCCAATACCTGAGAGGCGTTATAACTGTTTGATTCCTCCTCCTCCAGGGTACAAGATTCCAATCAGCTGGCCCAAAAGCAGAGACCAGGTGTGGAAGGCAAACATACCTCATACCCATCTTGCAACTGAAAAATCTGACCAGAATTGGATGGTTGTGAAAGGTGAAAAAATAGTTTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCTGATAAATACATTGCTTCAATTGCTAATATGCTTAATTTTCCAAACAATAATATAAACAATGAGGGAAGAGTGAGGTCTGTTCTTGATGTTGGGTGTGGAGTTGCTAGCTTTGGAGGATATCTTCTTTCTTCTGATGTGATAGCAATGTCATTGGCTCCAAACGATGTCCATCAGAATCAAATTCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTAGGGACCCTGAGGCTCCCTTACCCAAGTAGATCTTTTGAATTTGCTCATTGTTCTCGCTGTAGAATTGATTGGCTTCAGAGAGATGGTATCCTTCTCCTTGAGCTGGATAGGTTATTGAGGCCAGGAGGTTATTTTGCATATTCATCTCCTGAAGCCTATGCACAGGATGAGGAAGATAGGAGAATATGGAGAGAAATGAGTGCTCTTGTGGAGAGGATGTGCTGGAAAATTGCTGCTAAGAGGAATCAGACTGTTATTTGGGTTAAGCCTCTAACAAATAGTTGCTACTTAAAGAGAATGCCTGGTACTTTGCCTCCACTATGCAGATCTGATGATGATCCTGATGCTGTTTCCGGAGTTAAAATGAAAGCTTGTATTTCACGCTATTCTGATCAAATGCACAAAGCAAAAGGAAGCGGTTTGGCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCACTATTCTACTAAAATGTTTGAGAAGGACCTGGAAGTTTGGCAAGAAAGAGTTGATAATTACTGGAGCAAGCTAGGCAGTAAGATTAAAGCAGGCACAATAAGGAATGTGATGGATATGAGGGCAAATATAGGTTCATTCGCAGCAGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTGCCACAAAATGAACCAAAATCTCTCGCCATAATATATGACAGAGGATTGATAGGAGCAGTTCACAACTGGTGTGAAGCTTTTTCAACCTACCCTCGAACTTATGATCTTCTTCATGCATGGACTGTATTTTCTGATATTATTAAGAAAGAATGCAGTCCAGAGGACTTGTTGATTGAGATGGATAGAATTCTGAGGCCAAAGGGCTTCATCATTGTCTATGATAAGCGGTCAGTGGTGGAGTATGTGAGGAAATACTTGCCTGCATTACACTGGGATGTTCTGACAATTTATGACATAGATCAAGGTAAAGATGAGAATGATGATGAAGATGATGATCATGCAGTGGTTATAATTCAAAAGAAGATGTGGCTCACAAGTGATAGTATCCAGGTTTCAGAATAG 1854 0.4132 MASMARGRADVNSRKNLVVAVLFFVIVGVFFYFYSQSGDSSIVEYGDKSLRQFGLKGDRDVSESSSTLIGGEDSAIPKTIPVCDDRLSELIPCLDRNLIYQTRLKLDLAVMEHYERHCPIPERRYNCLIPPPPGYKIPISWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGEKIVFPGGGTHFHYGADKYIASIANMLNFPNNNINNEGRVRSVLDVGCGVASFGGYLLSSDVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFEFAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMSALVERMCWKIAAKRNQTVIWVKPLTNSCYLKRMPGTLPPLCRSDDDPDAVSGVKMKACISRYSDQMHKAKGSGLAPWPARLTTPPPRLAEIHYSTKMFEKDLEVWQERVDNYWSKLGSKIKAGTIRNVMDMRANIGSFAAALKDKDVWVMNVVPQNEPKSLAIIYDRGLIGAVHNWCEAFSTYPRTYDLLHAWTVFSDIIKKECSPEDLLIEMDRILRPKGFIIVYDKRSVVEYVRKYLPALHWDVLTIYDIDQGKDENDDEDDDHAVVIIQKKMWLTSDSIQVSE* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0194 617 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 89 584 IPR004159 GO:0008168
Vra3g0194 617 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 9 615 IPR004159 GO:0008168
Vra3g0194 617 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 425 575 IPR029063 -
Vra3g0194 617 PANTHER METHYLTRANSFERASE PMT1-RELATED 9 615 - -
Vra3g0194 617 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 351 IPR029063 -
Vra3g0194 617 Gene3D Vaccinia Virus protein VP39 206 351 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0194 Vra-Chr3 2280100 2285473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0194 - - gmx:100805403 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0194 3 2280100 2285473 Vra3g0194 3 2280100 2285473 ECH
Vra3g0194 3 2280100 2285473 Vra8g0072 8 783234 789629 PCT